SCOPe 2.08: Domain d4qa3b_: 4qa3 B:

Lineage for d4qa3b_ (4qa3 B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.42: Arginase/deacetylase [52767] (1 superfamily)
   3 layers: a/b/a, parallel beta-sheet of 8 strands, order 21387456

4. Superfamily c.42.1: Arginase/deacetylase [52768] (3 families)

5. Family c.42.1.2: Histone deacetylase, HDAC [52773] (4 proteins)
   automatically mapped to Pfam PF00850

6. Protein automated matches [190786] (1 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [188039] (41 PDB entries)

8. Domain d4qa3b_: 4qa3 B: [258796]
   Other proteins in same PDB: d4qa3a2
   automated match to d2v5wb_
   complexed with gol, k, tsn, zn

Details for d4qa3b_

PDB Entry: 4qa3, 2.88 Å

PDB Description: Crystal structure of T311M HDAC8 in complex with Trichostatin A (TSA)

PDB Compounds: (B:) Histone deacetylase 8

SCOPe Domain Sequences for d4qa3b_:

Sequence, based on SEQRES records:

>d4qa3b_ c.42.1.2 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
lvpvyiyspeyvsmcdslakipkrasmvhslieayalhkqmrivkpkvasmeematfhtd
aylqhlqkvsqegdddhpdsieyglgydcpategifdyaaaiggatitaaqclidgmckv
ainwsggwhhakkdeasgfcylndavlgilrlrrkferilyvdldlhhgdgvedafsfts
kvmtvslhkfspgffpgtgdvsdvglgkgryysvnvpiqdgiqdekyyqicesvlkevyq
afnpkavvlqlgadtiagdpmcsfnmtpvgigkclkyilqwqlatlilggggynlanmar
cwtyltgvilgktlsseipdhefftaygpdyvleitpscrpdrnephriqqilnyikgnl
khvv

Sequence, based on observed residues (ATOM records):

>d4qa3b_ c.42.1.2 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
lvpvyiyspeyvsmcdslakipkrasmvhslieayalhkqmrivkpkvasmeematfhtd
aylqhlqkvsqegdhpdsieyglgydcpategifdyaaaiggatitaaqclidgmckvai
nwsggwhhakkdeasgfcylndavlgilrlrrkferilyvdldlhhgdgvedafsftskv
mtvslhkfspgffpgtgdvsdvglgkgryysvnvpiqdgiqdekyyqicesvlkevyqaf
npkavvlqlgadtiagdpmcsfnmtpvgigkclkyilqwqlatlilggggynlanmarcw
tyltgvilgktlsseipdhefftaygpdyvleitpscrpdrnephriqqilnyikgnlkh
vv

Timeline for d4qa3b_:

• d4qa3b_ first appeared in SCOPe 2.04
  
• d4qa3b_ appears in SCOPe 2.07