Lineage for d4nwda_ (4nwd A:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2913607Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. 2913608Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. 2915150Family c.94.1.0: automated matches [191309] (1 protein)
    not a true family
  6. 2915151Protein automated matches [190039] (161 species)
    not a true protein
  7. 2915760Species Norway rat (Rattus norvegicus) [TaxId:10116] [186759] (113 PDB entries)
  8. 2915944Domain d4nwda_: 4nwd A: [258692]
    automated match to d3s9ea_
    complexed with 2qd, cl, k

Details for d4nwda_

PDB Entry: 4nwd (more details), 2.6 Å

PDB Description: crystal structure of the kainate receptor gluk3 ligand-binding domain in complex with the agonist (2s,4r)-4-(3-methylamino-3-oxopropyl) glutamic acid at 2.6 a resolution
PDB Compounds: (A:) Glutamate receptor ionotropic, kainate 3

SCOPe Domain Sequences for d4nwda_:

Sequence; same for both SEQRES and ATOM records: (download)

>d4nwda_ c.94.1.0 (A:) automated matches {Norway rat (Rattus norvegicus) [TaxId: 10116]}
nrslivttlleepfvmfrksdrtlygndrfegycidllkelahilgfsyeirlvedgkyg
aqddkgqwngmvkelidhkadlavapltithvrekaidfskpfmtlgvsilyrkgtpids
addlakqtkieygavkdgatmtffkkskistfekmwafmsskpsalvknneegiqrtlta
dyallmesttieyitqrncnltqigglidskgygigtpmgspyrdkitiailqlqeedkl
himkekwwrgsgcp

SCOPe Domain Coordinates for d4nwda_:

Click to download the PDB-style file with coordinates for d4nwda_.
(The format of our PDB-style files is described here.)

Timeline for d4nwda_: