Lineage for d4lyra1 (4lyr A:1-413)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2413227Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2416558Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2418840Family c.1.8.0: automated matches [191314] (1 protein)
    not a true family
  6. 2418841Protein automated matches [190075] (97 species)
    not a true protein
  7. 2419408Species Rhizomucor miehei [TaxId:4839] [256971] (7 PDB entries)
  8. 2419412Domain d4lyra1: 4lyr A:1-413 [258675]
    Other proteins in same PDB: d4lyra2
    automated match to d1uuqa_
    complexed with epe, trs; mutant

Details for d4lyra1

PDB Entry: 4lyr (more details), 2.5 Å

PDB Description: Glycoside Hydrolase Family 5 Mannosidase from Rhizomucor miehei, E301A mutant
PDB Compounds: (A:) Exo-beta-1,4-mannosidase

SCOPe Domain Sequences for d4lyra1:

Sequence; same for both SEQRES and ATOM records: (download)

>d4lyra1 c.1.8.0 (A:1-413) automated matches {Rhizomucor miehei [TaxId: 4839]}
afvkiasdgkgftrygepylirganywqgmnlgaddcsggdrkrmeleikqmaemginnl
rvmassegpddqpyrmrpsmmpqpgkynegvfvgldylldtmdrynmtavmtlgnfwqws
ggfgqyvawitgnqtipypvgdvtydeftqfaarfyndseiapkanklfkdhiytvqnrr
ntvngkiykedpvimswqianepqeapaswfeeistfikkgapkhlvsagleskldeydf
drahdhknidyttchcwvenwgiydpadpdglphaneymhdflesrskwaaqlnkpivme
afgmardawrnpedetykylpstptshkdeyyqkafnqivslasnrsfsgsnfwayggeg
rstyppnpygmvwlgdpphephgwysvysndttvqiikdynanllkvqkelsk

SCOPe Domain Coordinates for d4lyra1:

Click to download the PDB-style file with coordinates for d4lyra1.
(The format of our PDB-style files is described here.)

Timeline for d4lyra1:

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Domains from same chain:
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d4lyra2