Lineage for Species: Agrobacterium fabrum [TaxId: 176299]

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2485906Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. 2485907Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. 2487255Family c.94.1.0: automated matches [191309] (1 protein)
    not a true family
  6. 2487256Protein automated matches [190039] (145 species)
    not a true protein
  7. 2487281Species Agrobacterium fabrum [TaxId:176299] [258501] (13 PDB entries)

PDB entries in Species: Agrobacterium fabrum [TaxId: 176299]:

  1. Domain(s) for 4eq7:
  2. Domain(s) for 4euo:
  3. Domain(s) for 4nd9:
  4. Domain(s) for 4ne4:
  5. Domain(s) for 4qrz:
  6. Domain(s) for 4qsc:
  7. Domain(s) for 4qsd:
  8. Domain(s) for 4qse:
    1. 2487287Domain d4qsea_: 4qse A: [258993]
      automated match to d1fqba_
      complexed with gol
    2. 2487288Domain d4qseb_: 4qse B: [258992]
      automated match to d1fqba_
      complexed with gol
  9. Domain(s) for 4rjz:
  10. Domain(s) for 5l9m:
  11. Domain(s) for 5l9o:
    1. 2487293Domain d5l9oa_: 5l9o A: [323183]
      Other proteins in same PDB: d5l9ob2
      automated match to d4eq9a_
      complexed with ca, edo, gop
    2. 2487294Domain d5l9ob1: 5l9o B:36-277 [323053]
      Other proteins in same PDB: d5l9ob2
      automated match to d4eq9a_
      complexed with ca, edo, gop
  12. Domain(s) for 5l9s:
    1. 2487297Domain d5l9sa_: 5l9s A: [323064]
      automated match to d4edpa_
      complexed with act, edo
    2. 2487298Domain d5l9sb_: 5l9s B: [323043]
      automated match to d4edpa_
      complexed with act, edo
  13. Domain(s) for 5lom:
    1. 2487290Domain d5loma_: 5lom A: [323167]
      Other proteins in same PDB: d5lomb2, d5lomb3
      automated match to d4eq9a_
      complexed with edo, snw
    2. 2487291Domain d5lomb1: 5lom B:36-277 [323125]
      Other proteins in same PDB: d5lomb2, d5lomb3
      automated match to d4eq9a_
      complexed with edo, snw

More info for Species Agrobacterium fabrum [TaxId:176299] from c.94.1.0 automated matches

Timeline for Species Agrobacterium fabrum [TaxId:176299] from c.94.1.0 automated matches: