SCOPe 2.08: Domain d4pg3d2: 4pg3 D:230-581

Lineage for d4pg3d2 (4pg3 D:230-581)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.104: Class II aaRS and biotin synthetases [55680] (1 superfamily)
   contains large mixed beta-sheet

4. Superfamily d.104.1: Class II aaRS and biotin synthetases [55681] (5 families)

5. Family d.104.1.0: automated matches [227172] (1 protein)
   not a true family

6. Protein automated matches [226887] (24 species)
   not a true protein

7. Species Plasmodium falciparum [TaxId:36329] [234567] (7 PDB entries)

8. Domain d4pg3d2: 4pg3 D:230-581 [258135]
   Other proteins in same PDB: d4pg3a1, d4pg3b1, d4pg3c1, d4pg3d1
   automated match to d3bjua2
   complexed with krs, lys

Details for d4pg3d2

PDB Entry: 4pg3, 2.7 Å

PDB Description: crystal structure of krs complexed with inhibitor

PDB Compounds: (D:) Lysine--tRNA ligase

SCOPe Domain Sequences for d4pg3d2:

Sequence, based on SEQRES records:

>d4pg3d2 d.104.1.0 (D:230-581) automated matches {Plasmodium falciparum [TaxId: 36329]}
teiryrqryldllinessrhtfvtrtkiinflrnflnergffevetpmmnliagganarp
fithhndldldlylriatelplkmlivggidkvyeigkvfrnegidnthnpeftscefyw
ayadyndlikwsedffsqlvyhlfgtykisynkdgpenqpieidftppypkvsiveeiek
vtntileqpfdsnetiekminiikehkielpnpptaaklldqlashfienkyndkpffiv
ehpqimsplakyhrtkpglterlemficgkevlnaytelndpfkqkecfklqqkdrekgd
teaaqldsafctsleyglpptgglglgidritmfltnknsikdvilfptmrp

Sequence, based on observed residues (ATOM records):

>d4pg3d2 d.104.1.0 (D:230-581) automated matches {Plasmodium falciparum [TaxId: 36329]}
teiryrqryldllinessrhtfvtrtkiinflrnflnergffevetpmmnliagganarp
fithhndldldlylriatelplkmlivggidkvyeigkvfrnegidnthnpeftscefyw
ayadyndlikwsedffsqlvyhlfgtykisynkdgpenqpieidftppypkvsiveeiek
vtntileqpfdsnetiekminiikehkielpnpptaaklldqlashfienkyndkpffiv
ehpqimsplakyhrtkpglterlemficgkevlnaytelndpfkqkecfldsafctsley
glpptgglglgidritmfltnknsikdvilfptmrp

Timeline for d4pg3d2:

• d4pg3d2 first appeared in SCOPe 2.04
  
• d4pg3d2 appears in SCOPe 2.07