Lineage for d4o8fa_ (4o8f A:)

  1. Root: SCOPe 2.04
  2. 1473060Class a: All alpha proteins [46456] (285 folds)
  3. 1502431Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
    multihelical; 3 layers or orthogonally packed helices
  4. 1502432Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families) (S)
  5. 1502433Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)
  6. 1503273Protein automated matches [190059] (14 species)
    not a true protein
  7. 1503295Species Human (Homo sapiens) [TaxId:9606] [187214] (126 PDB entries)
  8. 1503504Domain d4o8fa_: 4o8f A: [258023]
    automated match to d4a4wa_
    complexed with brl; mutant

Details for d4o8fa_

PDB Entry: 4o8f (more details), 2.6 Å

PDB Description: crystal structure of the complex between ppargamma mutant r357a and rosiglitazone
PDB Compounds: (A:) Peroxisome proliferator-activated receptor gamma

SCOPe Domain Sequences for d4o8fa_:

Sequence, based on SEQRES records: (download)

>d4o8fa_ a.123.1.1 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
esadlralakhlydsyiksfpltkakarailtgkttdkspfviydmnslmmgedkikfkh
itplqeqskevairifqgcqfrsveavqeiteyaksipgfvnldlndqvtllkygvheii
ytmlaslmnkdgvlisegqgfmtreflkslakpfgdfmepkfefavkfnalelddsdlai
fiaviilsgdrpgllnvkpiediqdnllqalelqlklnhpessqlfakllqkmtdlrqiv
tehvqllqvikktetdmslhpllqeiykdly

Sequence, based on observed residues (ATOM records): (download)

>d4o8fa_ a.123.1.1 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
esadlralakhlydsyiksfpltkakarailtgktspfviydmnslmmgedtplevairi
fqgcqfrsveavqeiteyaksipgfvnldlndqvtllkygvheiiytmlaslmnkdgvli
segqgfmtreflkslakpfgdfmepkfefavkfnalelddsdlaifiaviilsgdrpgll
nvkpiediqdnllqalelqlklnhpessqlfakllqkmtdlrqivtehvqllqvikktel
hpllqeiykdly

SCOPe Domain Coordinates for d4o8fa_:

Click to download the PDB-style file with coordinates for d4o8fa_.
(The format of our PDB-style files is described here.)

Timeline for d4o8fa_: