Lineage for d4pdda1 (4pdd A:32-332)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2485906Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. 2485907Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. 2487255Family c.94.1.0: automated matches [191309] (1 protein)
    not a true family
  6. 2487256Protein automated matches [190039] (146 species)
    not a true protein
  7. 2487970Species Polaromonas sp. [TaxId:296591] [257484] (2 PDB entries)
  8. 2487971Domain d4pdda1: 4pdd A:32-332 [257485]
    Other proteins in same PDB: d4pdda2, d4pddb2, d4pddc2
    automated match to d4ovsa_
    complexed with eax, fmt, mla

Details for d4pdda1

PDB Entry: 4pdd (more details), 1.7 Å

PDB Description: crystal structure of a trap periplasmic solute binding protein from polaromonas sp js666 (bpro_0088, target efi-510167) bound to d- erythronate
PDB Compounds: (A:) TRAP dicarboxylate transporter, DctP subunit

SCOPe Domain Sequences for d4pdda1:

Sequence; same for both SEQRES and ATOM records: (download)

>d4pdda1 c.94.1.0 (A:32-332) automated matches {Polaromonas sp. [TaxId: 296591]}

SCOPe Domain Coordinates for d4pdda1:

Click to download the PDB-style file with coordinates for d4pdda1.
(The format of our PDB-style files is described here.)

Timeline for d4pdda1: