Lineage for d4oiof3 (4oio F:319-421)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1981147Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 1984585Superfamily a.4.13: Sigma3 and sigma4 domains of RNA polymerase sigma factors [88659] (4 families) (S)
  5. 1984684Family a.4.13.0: automated matches [254211] (1 protein)
    not a true family
  6. 1984685Protein automated matches [254475] (3 species)
    not a true protein
  7. 1984704Species Thermus thermophilus [TaxId:300852] [257268] (3 PDB entries)
  8. 1984706Domain d4oiof3: 4oio F:319-421 [257270]
    Other proteins in same PDB: d4oioc_, d4oiod_, d4oioe_, d4oiof1
    automated match to d1smyf2
    protein/DNA complex; protein/RNA complex; complexed with 2tm, atp, mg, zn

Details for d4oiof3

PDB Entry: 4oio (more details), 3.1 Å

PDB Description: Crystal structure of Thermus thermophilus pre-insertion substrate complex for de novo transcription initiation
PDB Compounds: (F:) DNA directed RNA polymerase sigma factor A

SCOPe Domain Sequences for d4oiof3:

Sequence; same for both SEQRES and ATOM records: (download)

>d4oiof3 a.4.13.0 (F:319-421) automated matches {Thermus thermophilus [TaxId: 300852]}

SCOPe Domain Coordinates for d4oiof3:

Click to download the PDB-style file with coordinates for d4oiof3.
(The format of our PDB-style files is described here.)

Timeline for d4oiof3: