Lineage for Species: Thermus thermophilus [TaxId: 300852]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1981563Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 1985191Superfamily a.4.13: Sigma3 and sigma4 domains of RNA polymerase sigma factors [88659] (4 families) (S)
  5. 1985292Family a.4.13.0: automated matches [254211] (1 protein)
    not a true family
  6. 1985293Protein automated matches [254475] (3 species)
    not a true protein
  7. 1985314Species Thermus thermophilus [TaxId:300852] [257268] (3 PDB entries)

PDB entries in Species: Thermus thermophilus [TaxId: 300852]:

  1. Domain(s) for 4oio:
    1. 1985315Domain d4oiof2: 4oio F:258-318 [257269]
      Other proteins in same PDB: d4oioc_, d4oiod_, d4oioe_, d4oiof1
      automated match to d1smyf1
      protein/DNA complex; protein/RNA complex; complexed with 2tm, atp, mg, zn
    2. 1985316Domain d4oiof3: 4oio F:319-421 [257270]
      Other proteins in same PDB: d4oioc_, d4oiod_, d4oioe_, d4oiof1
      automated match to d1smyf2
      protein/DNA complex; protein/RNA complex; complexed with 2tm, atp, mg, zn
  2. Domain(s) for 4q4z:
    1. 1985317Domain d4q4zf2: 4q4z F:258-318 [258307]
      Other proteins in same PDB: d4q4za1, d4q4za2, d4q4zb1, d4q4zb2, d4q4zc_, d4q4zd_, d4q4ze_, d4q4zf1
      automated match to d1smyf1
      protein/DNA complex; protein/RNA complex; complexed with 2tm, atp, mg, zn
    2. 1985318Domain d4q4zf3: 4q4z F:319-423 [258308]
      Other proteins in same PDB: d4q4za1, d4q4za2, d4q4zb1, d4q4zb2, d4q4zc_, d4q4zd_, d4q4ze_, d4q4zf1
      automated match to d1smyf2
      protein/DNA complex; protein/RNA complex; complexed with 2tm, atp, mg, zn
  3. Domain(s) for 4q5s:
    1. 1985319Domain d4q5sf2: 4q5s F:258-318 [259968]
      Other proteins in same PDB: d4q5sc_, d4q5sd_, d4q5se_, d4q5sf1
      automated match to d1smyf1
      protein/DNA complex; protein/RNA complex; complexed with atp, mg, zn
    2. 1985320Domain d4q5sf3: 4q5s F:319-422 [259969]
      Other proteins in same PDB: d4q5sc_, d4q5sd_, d4q5se_, d4q5sf1
      automated match to d1smyf2
      protein/DNA complex; protein/RNA complex; complexed with atp, mg, zn

More info for Species Thermus thermophilus [TaxId:300852] from a.4.13.0 automated matches

Timeline for Species Thermus thermophilus [TaxId:300852] from a.4.13.0 automated matches: