SCOPe 2.08: Domain d4kzdl2: 4kzd L:109-215

Lineage for d4kzdl2 (4kzd L:109-215)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (5 families)

5. Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 proteins)

6. Protein automated matches [190374] (15 species)
   not a true protein

7. Species Mouse (Mus musculus) [TaxId:10090] [224855] (650 PDB entries)

8. Domain d4kzdl2: 4kzd L:109-215 [256947]
   Other proteins in same PDB: d4kzdh_, d4kzdl1
   automated match to d4jg1l2
   protein/RNA complex; complexed with 1tu, k, mg

Details for d4kzdl2

PDB Entry: 4kzd, 2.19 Å

PDB Description: crystal structure of an rna aptamer in complex with fluorophore and fab

PDB Compounds: (L:) BL3-6 Fab antibody, light chain

SCOPe Domain Sequences for d4kzdl2:

Sequence; same for both SEQRES and ATOM records:

>d4kzdl2 b.1.1.2 (L:109-215) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
rtvaapsvfifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqd
skdstyslsstltlskadyekhkvyacevthqglsspvtksfnrgec

Timeline for d4kzdl2:

• d4kzdl2 first appeared in SCOPe 2.04
  
• d4kzdl2 appears in SCOPe 2.07