SCOPe 2.05: Domain d4k1rb_: 4k1r B:

Lineage for d4k1rb_ (4k1r B:)

1. Root: SCOPe 2.05

2. Class d: Alpha and beta proteins (a+b) [53931] (381 folds)

3. Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
   core: beta(2)-alpha-beta(2); mixed beta-sheet 2143

4. Superfamily d.15.1: Ubiquitin-like [54236] (9 families)

5. Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
   Pfam PF00240

6. Protein Ubiquitin [54238] (7 species)

7. Species Human (Homo sapiens) [TaxId:9606] [54239] (149 PDB entries)
   Uniprot P62988
   identical sequence in many other species

8. Domain d4k1rb_: 4k1r B: [256832]
   automated match to d3dbhi_
   complexed with cl, edo, zn

Details for d4k1rb_

PDB Entry: 4k1r, 1.63 Å

PDB Description: Crystal structure of Schizosaccharomyces pombe sst2 catalytic domain and Ubiquitin

PDB Compounds: (B:) Polyubiquitin-C

SCOPe Domain Sequences for d4k1rb_:

Sequence; same for both SEQRES and ATOM records:

>d4k1rb_ d.15.1.1 (B:) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
smqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdy
niqkestlhlvlrlrgg

Timeline for d4k1rb_:

• d4k1rb_ first appeared in SCOPe 2.04
  
• d4k1rb_ appears in SCOPe 2.06
  
• d4k1rb_ appears in the current release, SCOPe 2.08