Lineage for d4jkjb_ (4jkj B:)

  1. Root: SCOPe 2.06
  2. 2170735Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2173267Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. 2173268Superfamily d.3.1: Cysteine proteinases [54001] (24 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. 2173876Family d.3.1.6: Ubiquitin carboxyl-terminal hydrolase UCH-L [54050] (3 proteins)
    automatically mapped to Pfam PF01088
  6. 2173877Protein Ubiquitin carboxyl-terminal hydrolase isozyme l1 [142856] (1 species)
  7. 2173878Species Human (Homo sapiens) [TaxId:9606] [142857] (4 PDB entries)
    Uniprot P09936 1-223
  8. 2173882Domain d4jkjb_: 4jkj B: [256793]
    automated match to d2lena_
    complexed with so4

Details for d4jkjb_

PDB Entry: 4jkj (more details), 2.15 Å

PDB Description: Crystal Structure of the S18Y Variant of Ubiquitin Carboxy-terminal Hydrolase L1
PDB Compounds: (B:) Ubiquitin carboxyl-terminal hydrolase isozyme L1

SCOPe Domain Sequences for d4jkjb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d4jkjb_ d.3.1.6 (B:) Ubiquitin carboxyl-terminal hydrolase isozyme l1 {Human (Homo sapiens) [TaxId: 9606]}
mqlkpmeinpemlnkvlyrlgvagqwrfvdvlgleeeslgsvpapacallllfpltaqhe
nfrkkqieelkgqevspkvyfmkqtignscgtiglihavannqdklgfedgsvlkqflse
tekmspedrakcfekneaiqaahdavaqegqcrvddkvnfhfilfnnvdghlyeldgrmp
fpvnhgassedtllkdaakvcreftereqgevrfsavalckaa

SCOPe Domain Coordinates for d4jkjb_:

Click to download the PDB-style file with coordinates for d4jkjb_.
(The format of our PDB-style files is described here.)

Timeline for d4jkjb_: