SCOPe 2.08: Domain d4jkjb_: 4jkj B:

Lineage for d4jkjb_ (4jkj B:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.3: Cysteine proteinases [54000] (1 superfamily)
   consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn

4. Superfamily d.3.1: Cysteine proteinases [54001] (24 families)
   the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet

5. Family d.3.1.6: Ubiquitin carboxyl-terminal hydrolase UCH-L [54050] (3 proteins)
   automatically mapped to Pfam PF01088

6. Protein Ubiquitin carboxyl-terminal hydrolase isozyme l1 [142856] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [142857] (4 PDB entries)
   Uniprot P09936 1-223

8. Domain d4jkjb_: 4jkj B: [256793]
   automated match to d2lena_
   complexed with so4

Details for d4jkjb_

PDB Entry: 4jkj, 2.15 Å

PDB Description: Crystal Structure of the S18Y Variant of Ubiquitin Carboxy-terminal Hydrolase L1

PDB Compounds: (B:) Ubiquitin carboxyl-terminal hydrolase isozyme L1

SCOPe Domain Sequences for d4jkjb_:

Sequence; same for both SEQRES and ATOM records:

>d4jkjb_ d.3.1.6 (B:) Ubiquitin carboxyl-terminal hydrolase isozyme l1 {Human (Homo sapiens) [TaxId: 9606]}
mqlkpmeinpemlnkvlyrlgvagqwrfvdvlgleeeslgsvpapacallllfpltaqhe
nfrkkqieelkgqevspkvyfmkqtignscgtiglihavannqdklgfedgsvlkqflse
tekmspedrakcfekneaiqaahdavaqegqcrvddkvnfhfilfnnvdghlyeldgrmp
fpvnhgassedtllkdaakvcreftereqgevrfsavalckaa

Timeline for d4jkjb_:

• d4jkjb_ first appeared in SCOPe 2.04
  
• d4jkjb_ appears in SCOPe 2.07