Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2170735Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2240771Fold d.241: Ribosome binding domain-like [100965] (2 superfamilies)
    beta-(2)-alpha(2)-beta(2); 2 layers: beta/alpha; antiparallel beta-sheet: order 1243; topological similarity to the common core of ribosomal proteins L23 and L15e
  4. 2240783Superfamily d.241.2: Trigger factor ribosome-binding domain [102735] (2 families) (S)
    automatically mapped to Pfam PF05697
  5. 2240798Family d.241.2.0: automated matches [256436] (1 protein)
    not a true family
  6. 2240799Protein automated matches [256437] (2 species)
    not a true protein

Species:

  1. 2240800Escherichia coli [TaxId:1403831] [256438] (3 PDB entries)
    1. Domain for 2mlx:
    2. Domain for 2mly:
    3. Domain for 2mlz:
  2. 2240804Escherichia coli [TaxId:562] [342130] (2 PDB entries)
    1. Domains for 5owi:
      1. 2240805Domain d5owia1: 5owi A:1-131 [342140]
        Other proteins in same PDB: d5owia2, d5owia3, d5owib2, d5owib3
        automated match to d1w26a2
      2. 2240806Domain d5owib1: 5owi B:1-131 [342131]
        Other proteins in same PDB: d5owia2, d5owia3, d5owib2, d5owib3
        automated match to d1w26a2
    2. Domains for 5owj:
      1. 2240807Domain d5owja1: 5owj A:1-131 [342135]
        Other proteins in same PDB: d5owja2, d5owja3, d5owjb2, d5owjb3
        automated match to d1w26a2
      2. 2240808Domain d5owjb1: 5owj B:1-131 [342209]
        Other proteins in same PDB: d5owja2, d5owja3, d5owjb2, d5owjb3
        automated match to d1w26a2

More info for Protein automated matches from d.241.2.0: automated matches

Timeline for Protein automated matches from d.241.2.0: automated matches: