SCOPe 2.08: Domain d2mj8a1: 2mj8 A:2-64

Lineage for d2mj8a1 (2mj8 A:2-64)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.34: SH3-like barrel [50036] (21 superfamilies)
   barrel, partly opened; n*=4, S*=8; meander
   the last strand is interrupted by a turn of 3-10 helix

4. Superfamily b.34.13: Chromo domain-like [54160] (4 families)
   SH3-like barrel is capped by a C-terminal helix

5. Family b.34.13.2: Chromo domain [54165] (8 proteins)
   lacks the SH3-like barrel first strand that can be complemented by bound peptide ligand; in shadow chromo domain the corresponding site is altered by insertion; similarity to the IL8-like fold

6. Protein automated matches [191035] (3 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [188859] (14 PDB entries)

8. Domain d2mj8a1: 2mj8 A:2-64 [256432]
   Other proteins in same PDB: d2mj8a2
   automated match to d2dnta1

Details for d2mj8a1

PDB Entry: 2mj8

PDB Description: solution structure of cdyl2 chromodomain

PDB Compounds: (A:) Chromodomain Y-like protein 2

SCOPe Domain Sequences for d2mj8a1:

Sequence; same for both SEQRES and ATOM records:

>d2mj8a1 b.34.13.2 (A:2-64) automated matches {Human (Homo sapiens) [TaxId: 9606]}
asgdlyeverivdkrknkkgkweylirwkgygstedtwepehhllhceefidefnglhms
kdk

Timeline for d2mj8a1:

• d2mj8a1 first appeared in SCOPe 2.04, called d2mj8a_
  
• d2mj8a1 appears in SCOPe 2.07