Lineage for Species: Lactobacillus plantarum [TaxId: 644042]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2108258Fold c.36: Thiamin diphosphate-binding fold (THDP-binding) [52517] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465
  4. 2108259Superfamily c.36.1: Thiamin diphosphate-binding fold (THDP-binding) [52518] (9 families) (S)
    there are two different functional modules of this fold: pyridine-binding (Pyr) and pyrophosphate-binding (PP) modules
    two Pyr and two PP modules assemble together in a conserved heterotetrameric core that binds two THDP coenzyme molecules
  5. 2108851Family c.36.1.0: automated matches [227300] (1 protein)
    not a true family
  6. 2108852Protein automated matches [227126] (20 species)
    not a true protein
  7. 2108973Species Lactobacillus plantarum [TaxId:644042] [256254] (3 PDB entries)

PDB entries in Species: Lactobacillus plantarum [TaxId: 644042]:

  1. Domain(s) for 4fee:
    1. 2108982Domain d4feea1: 4fee A:9-182 [251951]
      Other proteins in same PDB: d4feea2, d4feeb2
      automated match to d1powa2
      complexed with fad, gol, mg, po4, pyr, tdm
    2. 2108983Domain d4feea3: 4fee A:366-594 [251953]
      Other proteins in same PDB: d4feea2, d4feeb2
      automated match to d1powa3
      complexed with fad, gol, mg, po4, pyr, tdm
    3. 2108984Domain d4feeb1: 4fee B:9-182 [251954]
      Other proteins in same PDB: d4feea2, d4feeb2
      automated match to d1powa2
      complexed with fad, gol, mg, po4, pyr, tdm
    4. 2108985Domain d4feeb3: 4fee B:366-591 [251956]
      Other proteins in same PDB: d4feea2, d4feeb2
      automated match to d1powa3
      complexed with fad, gol, mg, po4, pyr, tdm
  2. Domain(s) for 4feg:
    1. 2108978Domain d4fega1: 4feg A:9-182 [251957]
      Other proteins in same PDB: d4fega2, d4fegb2
      automated match to d1powa2
      complexed with fad, gol, mg, po4, pyr, tdm
    2. 2108979Domain d4fega3: 4feg A:366-591 [251959]
      Other proteins in same PDB: d4fega2, d4fegb2
      automated match to d1powa3
      complexed with fad, gol, mg, po4, pyr, tdm
    3. 2108980Domain d4fegb1: 4feg B:9-182 [251960]
      Other proteins in same PDB: d4fega2, d4fegb2
      automated match to d1powa2
      complexed with fad, gol, mg, po4, pyr, tdm
    4. 2108981Domain d4fegb3: 4feg B:366-591 [251962]
      Other proteins in same PDB: d4fega2, d4fegb2
      automated match to d1powa3
      complexed with fad, gol, mg, po4, pyr, tdm
  3. Domain(s) for 4kgd:
    1. 2108974Domain d4kgda1: 4kgd A:9-182 [253259]
      Other proteins in same PDB: d4kgda2, d4kgdb2
      automated match to d1powa2
      complexed with fad, gol, k, mg, po4, tdp
    2. 2108975Domain d4kgda3: 4kgd A:366-594 [253261]
      Other proteins in same PDB: d4kgda2, d4kgdb2
      automated match to d1powa3
      complexed with fad, gol, k, mg, po4, tdp
    3. 2108976Domain d4kgdb1: 4kgd B:9-182 [253262]
      Other proteins in same PDB: d4kgda2, d4kgdb2
      automated match to d1powa2
      complexed with fad, gol, k, mg, po4, tdp
    4. 2108977Domain d4kgdb3: 4kgd B:366-593 [253264]
      Other proteins in same PDB: d4kgda2, d4kgdb2
      automated match to d1powa3
      complexed with fad, gol, k, mg, po4, tdp

More info for Species Lactobacillus plantarum [TaxId:644042] from c.36.1.0 automated matches

Timeline for Species Lactobacillus plantarum [TaxId:644042] from c.36.1.0 automated matches: