Lineage for Species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2154577Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. 2154578Superfamily d.3.1: Cysteine proteinases [54001] (24 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. 2155423Family d.3.1.0: automated matches [191342] (1 protein)
    not a true family
  6. 2155424Protein automated matches [190230] (20 species)
    not a true protein
  7. 2155513Species Nematode (Caenorhabditis elegans) [TaxId:6239] [256233] (2 PDB entries)

PDB entries in Species: Nematode (Caenorhabditis elegans) [TaxId: 6239]:

  1. Domain(s) for 4dhi:
  2. Domain(s) for 4dhj:
    1. 2155515Domain d4dhja_: 4dhj A: [240059]
      Other proteins in same PDB: d4dhjb_, d4dhjc_, d4dhjd_, d4dhjf_, d4dhjg_, d4dhjh_, d4dhjj_, d4dhjk_, d4dhjm_, d4dhjn_
      automated match to d4i6la_
    2. 2155516Domain d4dhje_: 4dhj E: [240060]
      Other proteins in same PDB: d4dhjb_, d4dhjc_, d4dhjd_, d4dhjf_, d4dhjg_, d4dhjh_, d4dhjj_, d4dhjk_, d4dhjm_, d4dhjn_
      automated match to d4i6la_
    3. 2155517Domain d4dhji_: 4dhj I: [240061]
      Other proteins in same PDB: d4dhjb_, d4dhjc_, d4dhjd_, d4dhjf_, d4dhjg_, d4dhjh_, d4dhjj_, d4dhjk_, d4dhjm_, d4dhjn_
      automated match to d4i6la_
    4. 2155518Domain d4dhjl_: 4dhj L: [240062]
      Other proteins in same PDB: d4dhjb_, d4dhjc_, d4dhjd_, d4dhjf_, d4dhjg_, d4dhjh_, d4dhjj_, d4dhjk_, d4dhjm_, d4dhjn_
      automated match to d4i6la_

More info for Species Nematode (Caenorhabditis elegans) [TaxId:6239] from d.3.1.0 automated matches

Timeline for Species Nematode (Caenorhabditis elegans) [TaxId:6239] from d.3.1.0 automated matches: