Lineage for Species: Adeno-associated virus - 1 [TaxId: 85106]

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2821496Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2823004Superfamily b.121.5: ssDNA viruses [88645] (4 families) (S)
  5. 2823027Family b.121.5.2: Parvoviridae-like VP [88646] (3 proteins)
    automatically mapped to Pfam PF00740
  6. 2823053Protein automated matches [190920] (12 species)
    not a true protein
  7. 2823054Species Adeno-associated virus - 1 [TaxId:85106] [255978] (3 PDB entries)

PDB entries in Species: Adeno-associated virus - 1 [TaxId: 85106]:

  1. Domain(s) for 3ng9:
    1. 2823055Domain d3ng9a_: 3ng9 A: [247905]
      automated match to d1lp3a_
      complexed with ade, cyt
    2. 2823056Domain d3ng9b_: 3ng9 B: [247906]
      automated match to d1lp3a_
      complexed with ade, cyt
    3. 2823057Domain d3ng9c_: 3ng9 C: [247907]
      automated match to d1lp3a_
      complexed with ade, cyt
    4. 2823058Domain d3ng9d_: 3ng9 D: [247908]
      automated match to d1lp3a_
      complexed with ade, cyt
    5. 2823059Domain d3ng9e_: 3ng9 E: [247909]
      automated match to d1lp3a_
      complexed with ade, cyt
    6. 2823060Domain d3ng9f_: 3ng9 F: [247910]
      automated match to d1lp3a_
      complexed with ade, cyt
    7. 2823061Domain d3ng9g_: 3ng9 G: [247911]
      automated match to d1lp3a_
      complexed with ade, cyt
    8. 2823062Domain d3ng9h_: 3ng9 H: [247912]
      automated match to d1lp3a_
      complexed with ade, cyt
    9. 2823063Domain d3ng9i_: 3ng9 I: [247913]
      automated match to d1lp3a_
      complexed with ade, cyt
    10. 2823064Domain d3ng9j_: 3ng9 J: [247914]
      automated match to d1lp3a_
      complexed with ade, cyt
  2. Domain(s) for 5egc:
  3. Domain(s) for 6jcr:

More info for Species Adeno-associated virus - 1 [TaxId:85106] from b.121.5.2 automated matches

Timeline for Species Adeno-associated virus - 1 [TaxId:85106] from b.121.5.2 automated matches: