Lineage for Species: Adeno-associated virus 3b [TaxId: 68742]

  1. Root: SCOPe 2.06
  2. 2021373Class b: All beta proteins [48724] (177 folds)
  3. 2086376Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2087350Superfamily b.121.5: ssDNA viruses [88645] (3 families) (S)
  5. 2087369Family b.121.5.2: Parvoviridae-like VP [88646] (3 proteins)
    automatically mapped to Pfam PF00740
  6. 2087395Protein automated matches [190920] (7 species)
    not a true protein
  7. 2087496Species Adeno-associated virus 3b [TaxId:68742] [255908] (2 PDB entries)

PDB entries in Species: Adeno-associated virus 3b [TaxId: 68742]:

  1. Domain(s) for 3kic:
    1. 2087497Domain d3kica_: 3kic A: [247164]
      automated match to d1lp3a_
      complexed with d5m
    2. 2087498Domain d3kicb_: 3kic B: [247165]
      automated match to d1lp3a_
      complexed with d5m
    3. 2087499Domain d3kicc_: 3kic C: [247166]
      automated match to d1lp3a_
      complexed with d5m
    4. 2087500Domain d3kicd_: 3kic D: [247167]
      automated match to d1lp3a_
      complexed with d5m
    5. 2087501Domain d3kice_: 3kic E: [247168]
      automated match to d1lp3a_
      complexed with d5m
    6. 2087502Domain d3kicf_: 3kic F: [247169]
      automated match to d1lp3a_
      complexed with d5m
    7. 2087503Domain d3kicg_: 3kic G: [247170]
      automated match to d1lp3a_
      complexed with d5m
    8. 2087504Domain d3kich_: 3kic H: [247171]
      automated match to d1lp3a_
      complexed with d5m
    9. 2087505Domain d3kici_: 3kic I: [247172]
      automated match to d1lp3a_
      complexed with d5m
    10. 2087506Domain d3kicj_: 3kic J: [247173]
      automated match to d1lp3a_
      complexed with d5m
    11. 2087507Domain d3kick_: 3kic K: [247174]
      automated match to d1lp3a_
      complexed with d5m
    12. 2087508Domain d3kicl_: 3kic L: [247175]
      automated match to d1lp3a_
      complexed with d5m
    13. 2087509Domain d3kicm_: 3kic M: [247176]
      automated match to d1lp3a_
      complexed with d5m
    14. 2087510Domain d3kicn_: 3kic N: [247177]
      automated match to d1lp3a_
      complexed with d5m
    15. 2087511Domain d3kico_: 3kic O: [247178]
      automated match to d1lp3a_
      complexed with d5m
    16. 2087512Domain d3kicp_: 3kic P: [247179]
      automated match to d1lp3a_
      complexed with d5m
    17. 2087513Domain d3kicq_: 3kic Q: [247180]
      automated match to d1lp3a_
      complexed with d5m
    18. 2087514Domain d3kicr_: 3kic R: [247181]
      automated match to d1lp3a_
      complexed with d5m
    19. 2087515Domain d3kics_: 3kic S: [247182]
      automated match to d1lp3a_
      complexed with d5m
    20. 2087516Domain d3kict_: 3kic T: [247183]
      automated match to d1lp3a_
      complexed with d5m
  2. Domain(s) for 3kie:
    1. 2087517Domain d3kiea_: 3kie A: [247184]
      automated match to d1lp3a_
      complexed with d5m
    2. 2087518Domain d3kieb_: 3kie B: [247185]
      automated match to d1lp3a_
      complexed with d5m
    3. 2087519Domain d3kiec_: 3kie C: [247186]
      automated match to d1lp3a_
      complexed with d5m
    4. 2087520Domain d3kied_: 3kie D: [247187]
      automated match to d1lp3a_
      complexed with d5m
    5. 2087521Domain d3kiee_: 3kie E: [247188]
      automated match to d1lp3a_
      complexed with d5m
    6. 2087522Domain d3kief_: 3kie F: [247189]
      automated match to d1lp3a_
      complexed with d5m
    7. 2087523Domain d3kieg_: 3kie G: [247190]
      automated match to d1lp3a_
      complexed with d5m
    8. 2087524Domain d3kieh_: 3kie H: [247191]
      automated match to d1lp3a_
      complexed with d5m
    9. 2087525Domain d3kiei_: 3kie I: [247192]
      automated match to d1lp3a_
      complexed with d5m
    10. 2087526Domain d3kiej_: 3kie J: [247193]
      automated match to d1lp3a_
      complexed with d5m
    11. 2087527Domain d3kiek_: 3kie K: [247194]
      automated match to d1lp3a_
      complexed with d5m
    12. 2087528Domain d3kiel_: 3kie L: [247195]
      automated match to d1lp3a_
      complexed with d5m
    13. 2087529Domain d3kiem_: 3kie M: [247196]
      automated match to d1lp3a_
      complexed with d5m
    14. 2087530Domain d3kien_: 3kie N: [247197]
      automated match to d1lp3a_
      complexed with d5m
    15. 2087531Domain d3kieo_: 3kie O: [247198]
      automated match to d1lp3a_
      complexed with d5m
    16. 2087532Domain d3kiep_: 3kie P: [247199]
      automated match to d1lp3a_
      complexed with d5m
    17. 2087533Domain d3kieq_: 3kie Q: [247200]
      automated match to d1lp3a_
      complexed with d5m
    18. 2087534Domain d3kier_: 3kie R: [247201]
      automated match to d1lp3a_
      complexed with d5m
    19. 2087535Domain d3kies_: 3kie S: [247202]
      automated match to d1lp3a_
      complexed with d5m
    20. 2087536Domain d3kiet_: 3kie T: [247203]
      automated match to d1lp3a_
      complexed with d5m

More info for Species Adeno-associated virus 3b [TaxId:68742] from b.121.5.2 automated matches

Timeline for Species Adeno-associated virus 3b [TaxId:68742] from b.121.5.2 automated matches: