Lineage for Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2108258Fold c.36: Thiamin diphosphate-binding fold (THDP-binding) [52517] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465
  4. 2108259Superfamily c.36.1: Thiamin diphosphate-binding fold (THDP-binding) [52518] (9 families) (S)
    there are two different functional modules of this fold: pyridine-binding (Pyr) and pyrophosphate-binding (PP) modules
    two Pyr and two PP modules assemble together in a conserved heterotetrameric core that binds two THDP coenzyme molecules
  5. 2108851Family c.36.1.0: automated matches [227300] (1 protein)
    not a true family
  6. 2108852Protein automated matches [227126] (20 species)
    not a true protein
  7. 2109141Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [255810] (2 PDB entries)

PDB entries in Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]:

  1. Domain(s) for 3e9y:
    1. 2109144Domain d3e9ya1: 3e9y A:87-280 [245800]
      Other proteins in same PDB: d3e9ya2
      automated match to d1ybha2
      complexed with 1ms, fab, mg, nhe, tdm
    2. 2109145Domain d3e9ya3: 3e9y A:460-668 [245802]
      Other proteins in same PDB: d3e9ya2
      automated match to d1ybha3
      complexed with 1ms, fab, mg, nhe, tdm
  2. Domain(s) for 3ea4:
    1. 2109142Domain d3ea4a1: 3ea4 A:87-280 [245803]
      Other proteins in same PDB: d3ea4a2
      automated match to d1ybha2
      complexed with 2sm, fab, mg, nhe, tdm
    2. 2109143Domain d3ea4a3: 3ea4 A:460-668 [245805]
      Other proteins in same PDB: d3ea4a2
      automated match to d1ybha3
      complexed with 2sm, fab, mg, nhe, tdm

More info for Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from c.36.1.0 automated matches

Timeline for Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from c.36.1.0 automated matches: