Lineage for Species: Thermus thermophilus HB8 [TaxId: 300852]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1981147Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 1984585Superfamily a.4.13: Sigma3 and sigma4 domains of RNA polymerase sigma factors [88659] (4 families) (S)
  5. 1984684Family a.4.13.0: automated matches [254211] (1 protein)
    not a true family
  6. 1984685Protein automated matches [254475] (3 species)
    not a true protein
  7. 1984686Species Thermus thermophilus HB8 [TaxId:300852] [255804] (3 PDB entries)

PDB entries in Species: Thermus thermophilus HB8 [TaxId: 300852]:

  1. Domain(s) for 3dxj:
    1. 1984695Domain d3dxjf2: 3dxj F:258-318 [239226]
      Other proteins in same PDB: d3dxjc_, d3dxjd_, d3dxje_, d3dxjf1, d3dxjm_, d3dxjn_, d3dxjo_, d3dxjp1
      automated match to d1smyf1
      protein/DNA complex; protein/RNA complex; complexed with mg, mpd, ne6, po4, zn
    2. 1984696Domain d3dxjf3: 3dxj F:319-422 [239227]
      Other proteins in same PDB: d3dxjc_, d3dxjd_, d3dxje_, d3dxjf1, d3dxjm_, d3dxjn_, d3dxjo_, d3dxjp1
      automated match to d1smyf2
      protein/DNA complex; protein/RNA complex; complexed with mg, mpd, ne6, po4, zn
    3. 1984697Domain d3dxjp2: 3dxj P:258-318 [239229]
      Other proteins in same PDB: d3dxjc_, d3dxjd_, d3dxje_, d3dxjf1, d3dxjm_, d3dxjn_, d3dxjo_, d3dxjp1
      automated match to d1smyf1
      protein/DNA complex; protein/RNA complex; complexed with mg, mpd, ne6, po4, zn
    4. 1984698Domain d3dxjp3: 3dxj P:319-422 [239230]
      Other proteins in same PDB: d3dxjc_, d3dxjd_, d3dxje_, d3dxjf1, d3dxjm_, d3dxjn_, d3dxjo_, d3dxjp1
      automated match to d1smyf2
      protein/DNA complex; protein/RNA complex; complexed with mg, mpd, ne6, po4, zn
  2. Domain(s) for 4g7h:
    1. 1984687Domain d4g7hf2: 4g7h F:258-318 [240147]
      Other proteins in same PDB: d4g7ha1, d4g7ha2, d4g7hb1, d4g7hb2, d4g7hc_, d4g7hd_, d4g7he_, d4g7hf1, d4g7hk1, d4g7hk2, d4g7hl1, d4g7hl2, d4g7hm_, d4g7hn_, d4g7ho_, d4g7hp1
      automated match to d1smyf1
      protein/DNA complex; protein/RNA complex; complexed with mg, zn
    2. 1984688Domain d4g7hf3: 4g7h F:319-423 [240148]
      Other proteins in same PDB: d4g7ha1, d4g7ha2, d4g7hb1, d4g7hb2, d4g7hc_, d4g7hd_, d4g7he_, d4g7hf1, d4g7hk1, d4g7hk2, d4g7hl1, d4g7hl2, d4g7hm_, d4g7hn_, d4g7ho_, d4g7hp1
      automated match to d1smyf2
      protein/DNA complex; protein/RNA complex; complexed with mg, zn
    3. 1984689Domain d4g7hp2: 4g7h P:258-318 [240150]
      Other proteins in same PDB: d4g7ha1, d4g7ha2, d4g7hb1, d4g7hb2, d4g7hc_, d4g7hd_, d4g7he_, d4g7hf1, d4g7hk1, d4g7hk2, d4g7hl1, d4g7hl2, d4g7hm_, d4g7hn_, d4g7ho_, d4g7hp1
      automated match to d1smyf1
      protein/DNA complex; protein/RNA complex; complexed with mg, zn
    4. 1984690Domain d4g7hp3: 4g7h P:319-423 [240151]
      Other proteins in same PDB: d4g7ha1, d4g7ha2, d4g7hb1, d4g7hb2, d4g7hc_, d4g7hd_, d4g7he_, d4g7hf1, d4g7hk1, d4g7hk2, d4g7hl1, d4g7hl2, d4g7hm_, d4g7hn_, d4g7ho_, d4g7hp1
      automated match to d1smyf2
      protein/DNA complex; protein/RNA complex; complexed with mg, zn
  3. Domain(s) for 4g7o:
    1. 1984691Domain d4g7of2: 4g7o F:258-318 [240153]
      Other proteins in same PDB: d4g7oa1, d4g7oa2, d4g7ob1, d4g7ob2, d4g7oc_, d4g7od_, d4g7oe_, d4g7of1, d4g7ok1, d4g7ok2, d4g7ol1, d4g7ol2, d4g7om_, d4g7on_, d4g7oo_, d4g7op1
      automated match to d1smyf1
      protein/DNA complex; protein/RNA complex; complexed with mg, zn
    2. 1984692Domain d4g7of3: 4g7o F:319-423 [240154]
      Other proteins in same PDB: d4g7oa1, d4g7oa2, d4g7ob1, d4g7ob2, d4g7oc_, d4g7od_, d4g7oe_, d4g7of1, d4g7ok1, d4g7ok2, d4g7ol1, d4g7ol2, d4g7om_, d4g7on_, d4g7oo_, d4g7op1
      automated match to d1smyf2
      protein/DNA complex; protein/RNA complex; complexed with mg, zn
    3. 1984693Domain d4g7op2: 4g7o P:258-318 [240156]
      Other proteins in same PDB: d4g7oa1, d4g7oa2, d4g7ob1, d4g7ob2, d4g7oc_, d4g7od_, d4g7oe_, d4g7of1, d4g7ok1, d4g7ok2, d4g7ol1, d4g7ol2, d4g7om_, d4g7on_, d4g7oo_, d4g7op1
      automated match to d1smyf1
      protein/DNA complex; protein/RNA complex; complexed with mg, zn
    4. 1984694Domain d4g7op3: 4g7o P:319-423 [240157]
      Other proteins in same PDB: d4g7oa1, d4g7oa2, d4g7ob1, d4g7ob2, d4g7oc_, d4g7od_, d4g7oe_, d4g7of1, d4g7ok1, d4g7ok2, d4g7ol1, d4g7ol2, d4g7om_, d4g7on_, d4g7oo_, d4g7op1
      automated match to d1smyf2
      protein/DNA complex; protein/RNA complex; complexed with mg, zn

More info for Species Thermus thermophilus HB8 [TaxId:300852] from a.4.13.0 automated matches

Timeline for Species Thermus thermophilus HB8 [TaxId:300852] from a.4.13.0 automated matches: