SCOPe 2.05: Species: Zymomonas mobilis [TaxId: 542]

Lineage for Species: Zymomonas mobilis [TaxId: 542]

Root: SCOPe 2.05
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.36: Thiamin diphosphate-binding fold (THDP-binding) [52517] (1 superfamily)
3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465

Superfamily c.36.1: Thiamin diphosphate-binding fold (THDP-binding) [52518] (9 families)

(S)

there are two different functional modules of this fold: pyridine-binding (Pyr) and pyrophosphate-binding (PP) modules
two Pyr and two PP modules assemble together in a conserved heterotetrameric core that binds two THDP coenzyme molecules

Family c.36.1.0: automated matches [227300] (1 protein)
not a true family
Protein automated matches [227126] (15 species)
not a true protein
Species Zymomonas mobilis [TaxId:542] [255668] (5 PDB entries)

PDB entries in Species: Zymomonas mobilis [TaxId: 542]:

Domain(s) for 2wva:
1. Domain d2wvaa1: 2wva A:2-187 [244285]
  Other proteins in same PDB: d2wvaa2, d2wvab2, d2wvae2, d2wvaf2, d2wvav2, d2wvax2, d2wvay2, d2wvaz2
  automated match to d1zpda2
  complexed with mg, pyr, tpu
2. Domain d2wvaa3: 2wva A:363-566 [244287]
  Other proteins in same PDB: d2wvaa2, d2wvab2, d2wvae2, d2wvaf2, d2wvav2, d2wvax2, d2wvay2, d2wvaz2
  automated match to d1zpda3
  complexed with mg, pyr, tpu
3. Domain d2wvab1: 2wva B:2-187 [244288]
  Other proteins in same PDB: d2wvaa2, d2wvab2, d2wvae2, d2wvaf2, d2wvav2, d2wvax2, d2wvay2, d2wvaz2
  automated match to d1zpda2
  complexed with mg, pyr, tpu
4. Domain d2wvab3: 2wva B:363-566 [244290]
  Other proteins in same PDB: d2wvaa2, d2wvab2, d2wvae2, d2wvaf2, d2wvav2, d2wvax2, d2wvay2, d2wvaz2
  automated match to d1zpda3
  complexed with mg, pyr, tpu
5. Domain d2wvae1: 2wva E:2-187 [244291]
  Other proteins in same PDB: d2wvaa2, d2wvab2, d2wvae2, d2wvaf2, d2wvav2, d2wvax2, d2wvay2, d2wvaz2
  automated match to d1zpda2
  complexed with mg, pyr, tpu
6. Domain d2wvae3: 2wva E:363-566 [244293]
  Other proteins in same PDB: d2wvaa2, d2wvab2, d2wvae2, d2wvaf2, d2wvav2, d2wvax2, d2wvay2, d2wvaz2
  automated match to d1zpda3
  complexed with mg, pyr, tpu
7. Domain d2wvaf1: 2wva F:2-187 [244294]
  Other proteins in same PDB: d2wvaa2, d2wvab2, d2wvae2, d2wvaf2, d2wvav2, d2wvax2, d2wvay2, d2wvaz2
  automated match to d1zpda2
  complexed with mg, pyr, tpu
8. Domain d2wvaf3: 2wva F:363-566 [244296]
  Other proteins in same PDB: d2wvaa2, d2wvab2, d2wvae2, d2wvaf2, d2wvav2, d2wvax2, d2wvay2, d2wvaz2
  automated match to d1zpda3
  complexed with mg, pyr, tpu
9. Domain d2wvav1: 2wva V:2-187 [244297]
  Other proteins in same PDB: d2wvaa2, d2wvab2, d2wvae2, d2wvaf2, d2wvav2, d2wvax2, d2wvay2, d2wvaz2
  automated match to d1zpda2
  complexed with mg, pyr, tpu
10. Domain d2wvav3: 2wva V:363-566 [244299]
  Other proteins in same PDB: d2wvaa2, d2wvab2, d2wvae2, d2wvaf2, d2wvav2, d2wvax2, d2wvay2, d2wvaz2
  automated match to d1zpda3
  complexed with mg, pyr, tpu
11. Domain d2wvax1: 2wva X:1-187 [244300]
  Other proteins in same PDB: d2wvaa2, d2wvab2, d2wvae2, d2wvaf2, d2wvav2, d2wvax2, d2wvay2, d2wvaz2
  automated match to d1zpda2
  complexed with mg, pyr, tpu
12. Domain d2wvax3: 2wva X:363-566 [244302]
  Other proteins in same PDB: d2wvaa2, d2wvab2, d2wvae2, d2wvaf2, d2wvav2, d2wvax2, d2wvay2, d2wvaz2
  automated match to d1zpda3
  complexed with mg, pyr, tpu
13. Domain d2wvay1: 2wva Y:2-187 [244303]
  Other proteins in same PDB: d2wvaa2, d2wvab2, d2wvae2, d2wvaf2, d2wvav2, d2wvax2, d2wvay2, d2wvaz2
  automated match to d1zpda2
  complexed with mg, pyr, tpu
14. Domain d2wvay3: 2wva Y:363-566 [244305]
  Other proteins in same PDB: d2wvaa2, d2wvab2, d2wvae2, d2wvaf2, d2wvav2, d2wvax2, d2wvay2, d2wvaz2
  automated match to d1zpda3
  complexed with mg, pyr, tpu
15. Domain d2wvaz1: 2wva Z:2-187 [244306]
  Other proteins in same PDB: d2wvaa2, d2wvab2, d2wvae2, d2wvaf2, d2wvav2, d2wvax2, d2wvay2, d2wvaz2
  automated match to d1zpda2
  complexed with mg, pyr, tpu
16. Domain d2wvaz3: 2wva Z:363-566 [244308]
  Other proteins in same PDB: d2wvaa2, d2wvab2, d2wvae2, d2wvaf2, d2wvav2, d2wvax2, d2wvay2, d2wvaz2
  automated match to d1zpda3
  complexed with mg, pyr, tpu
Domain(s) for 2wvg:
1. Domain d2wvga1: 2wvg A:2-187 [244313]
  Other proteins in same PDB: d2wvga2, d2wvgb2, d2wvge2, d2wvgf2
  automated match to d1zpda2
  complexed with f, mg, tpu
2. Domain d2wvga3: 2wvg A:363-566 [244315]
  Other proteins in same PDB: d2wvga2, d2wvgb2, d2wvge2, d2wvgf2
  automated match to d1zpda3
  complexed with f, mg, tpu
3. Domain d2wvgb1: 2wvg B:2-187 [244316]
  Other proteins in same PDB: d2wvga2, d2wvgb2, d2wvge2, d2wvgf2
  automated match to d1zpda2
  complexed with f, mg, tpu
4. Domain d2wvgb3: 2wvg B:363-566 [244318]
  Other proteins in same PDB: d2wvga2, d2wvgb2, d2wvge2, d2wvgf2
  automated match to d1zpda3
  complexed with f, mg, tpu
5. Domain d2wvge1: 2wvg E:2-187 [244319]
  Other proteins in same PDB: d2wvga2, d2wvgb2, d2wvge2, d2wvgf2
  automated match to d1zpda2
  complexed with f, mg, tpu
6. Domain d2wvge3: 2wvg E:363-566 [244321]
  Other proteins in same PDB: d2wvga2, d2wvgb2, d2wvge2, d2wvgf2
  automated match to d1zpda3
  complexed with f, mg, tpu
7. Domain d2wvgf1: 2wvg F:2-187 [244322]
  Other proteins in same PDB: d2wvga2, d2wvgb2, d2wvge2, d2wvgf2
  automated match to d1zpda2
  complexed with f, mg, tpu
8. Domain d2wvgf3: 2wvg F:363-566 [244324]
  Other proteins in same PDB: d2wvga2, d2wvgb2, d2wvge2, d2wvgf2
  automated match to d1zpda3
  complexed with f, mg, tpu
Domain(s) for 2wvh:
1. Domain d2wvha1: 2wvh A:1-187 [244325]
  Other proteins in same PDB: d2wvha2, d2wvhb2, d2wvhe2, d2wvhf2, d2wvhv2, d2wvhx2, d2wvhy2, d2wvhz2
  automated match to d1zpda2
2. Domain d2wvha3: 2wvh A:363-566 [244327]
  Other proteins in same PDB: d2wvha2, d2wvhb2, d2wvhe2, d2wvhf2, d2wvhv2, d2wvhx2, d2wvhy2, d2wvhz2
  automated match to d1zpda3
3. Domain d2wvhb1: 2wvh B:2-187 [244328]
  Other proteins in same PDB: d2wvha2, d2wvhb2, d2wvhe2, d2wvhf2, d2wvhv2, d2wvhx2, d2wvhy2, d2wvhz2
  automated match to d1zpda2
4. Domain d2wvhb3: 2wvh B:363-566 [244330]
  Other proteins in same PDB: d2wvha2, d2wvhb2, d2wvhe2, d2wvhf2, d2wvhv2, d2wvhx2, d2wvhy2, d2wvhz2
  automated match to d1zpda3
5. Domain d2wvhe1: 2wvh E:2-187 [244331]
  Other proteins in same PDB: d2wvha2, d2wvhb2, d2wvhe2, d2wvhf2, d2wvhv2, d2wvhx2, d2wvhy2, d2wvhz2
  automated match to d1zpda2
6. Domain d2wvhe3: 2wvh E:363-566 [244333]
  Other proteins in same PDB: d2wvha2, d2wvhb2, d2wvhe2, d2wvhf2, d2wvhv2, d2wvhx2, d2wvhy2, d2wvhz2
  automated match to d1zpda3
7. Domain d2wvhf1: 2wvh F:2-187 [244334]
  Other proteins in same PDB: d2wvha2, d2wvhb2, d2wvhe2, d2wvhf2, d2wvhv2, d2wvhx2, d2wvhy2, d2wvhz2
  automated match to d1zpda2
8. Domain d2wvhf3: 2wvh F:363-566 [244336]
  Other proteins in same PDB: d2wvha2, d2wvhb2, d2wvhe2, d2wvhf2, d2wvhv2, d2wvhx2, d2wvhy2, d2wvhz2
  automated match to d1zpda3
9. Domain d2wvhv1: 2wvh V:2-187 [244337]
  Other proteins in same PDB: d2wvha2, d2wvhb2, d2wvhe2, d2wvhf2, d2wvhv2, d2wvhx2, d2wvhy2, d2wvhz2
  automated match to d1zpda2
10. Domain d2wvhv3: 2wvh V:363-566 [244339]
  Other proteins in same PDB: d2wvha2, d2wvhb2, d2wvhe2, d2wvhf2, d2wvhv2, d2wvhx2, d2wvhy2, d2wvhz2
  automated match to d1zpda3
11. Domain d2wvhx1: 2wvh X:2-187 [244340]
  Other proteins in same PDB: d2wvha2, d2wvhb2, d2wvhe2, d2wvhf2, d2wvhv2, d2wvhx2, d2wvhy2, d2wvhz2
  automated match to d1zpda2
12. Domain d2wvhx3: 2wvh X:363-565 [244342]
  Other proteins in same PDB: d2wvha2, d2wvhb2, d2wvhe2, d2wvhf2, d2wvhv2, d2wvhx2, d2wvhy2, d2wvhz2
  automated match to d1zpda3
13. Domain d2wvhy1: 2wvh Y:2-187 [244343]
  Other proteins in same PDB: d2wvha2, d2wvhb2, d2wvhe2, d2wvhf2, d2wvhv2, d2wvhx2, d2wvhy2, d2wvhz2
  automated match to d1zpda2
14. Domain d2wvhy3: 2wvh Y:363-566 [244345]
  Other proteins in same PDB: d2wvha2, d2wvhb2, d2wvhe2, d2wvhf2, d2wvhv2, d2wvhx2, d2wvhy2, d2wvhz2
  automated match to d1zpda3
15. Domain d2wvhz1: 2wvh Z:2-187 [244346]
  Other proteins in same PDB: d2wvha2, d2wvhb2, d2wvhe2, d2wvhf2, d2wvhv2, d2wvhx2, d2wvhy2, d2wvhz2
  automated match to d1zpda2
16. Domain d2wvhz3: 2wvh Z:363-566 [244348]
  Other proteins in same PDB: d2wvha2, d2wvhb2, d2wvhe2, d2wvhf2, d2wvhv2, d2wvhx2, d2wvhy2, d2wvhz2
  automated match to d1zpda3
Domain(s) for 3oe1:
1. Domain d3oe1a1: 3oe1 A:2-187 [248166]
  Other proteins in same PDB: d3oe1a2, d3oe1b2, d3oe1c2, d3oe1d2
  automated match to d1zpda2
  complexed with gol, mg, tdl
2. Domain d3oe1a3: 3oe1 A:363-566 [248168]
  Other proteins in same PDB: d3oe1a2, d3oe1b2, d3oe1c2, d3oe1d2
  automated match to d1zpda3
  complexed with gol, mg, tdl
3. Domain d3oe1b1: 3oe1 B:2-187 [248169]
  Other proteins in same PDB: d3oe1a2, d3oe1b2, d3oe1c2, d3oe1d2
  automated match to d1zpda2
  complexed with gol, mg, tdl
4. Domain d3oe1b3: 3oe1 B:363-566 [248171]
  Other proteins in same PDB: d3oe1a2, d3oe1b2, d3oe1c2, d3oe1d2
  automated match to d1zpda3
  complexed with gol, mg, tdl
5. Domain d3oe1c1: 3oe1 C:2-187 [248172]
  Other proteins in same PDB: d3oe1a2, d3oe1b2, d3oe1c2, d3oe1d2
  automated match to d1zpda2
  complexed with gol, mg, tdl
6. Domain d3oe1c3: 3oe1 C:363-566 [248174]
  Other proteins in same PDB: d3oe1a2, d3oe1b2, d3oe1c2, d3oe1d2
  automated match to d1zpda3
  complexed with gol, mg, tdl
7. Domain d3oe1d1: 3oe1 D:2-187 [248175]
  Other proteins in same PDB: d3oe1a2, d3oe1b2, d3oe1c2, d3oe1d2
  automated match to d1zpda2
  complexed with gol, mg, tdl
8. Domain d3oe1d3: 3oe1 D:363-566 [248177]
  Other proteins in same PDB: d3oe1a2, d3oe1b2, d3oe1c2, d3oe1d2
  automated match to d1zpda3
  complexed with gol, mg, tdl
Domain(s) for 4zp1:
1. Domain d4zp1a1: 4zp1 A:2-187 [279089]
  Other proteins in same PDB: d4zp1a2, d4zp1b2, d4zp1c2, d4zp1d2
  automated match to d1zpda2
  complexed with gol, mg, ni, tpp
2. Domain d4zp1a3: 4zp1 A:363-566 [279091]
  Other proteins in same PDB: d4zp1a2, d4zp1b2, d4zp1c2, d4zp1d2
  automated match to d1zpda3
  complexed with gol, mg, ni, tpp
3. Domain d4zp1b1: 4zp1 B:2-187 [279092]
  Other proteins in same PDB: d4zp1a2, d4zp1b2, d4zp1c2, d4zp1d2
  automated match to d1zpda2
  complexed with gol, mg, ni, tpp
4. Domain d4zp1b3: 4zp1 B:363-566 [279094]
  Other proteins in same PDB: d4zp1a2, d4zp1b2, d4zp1c2, d4zp1d2
  automated match to d1zpda3
  complexed with gol, mg, ni, tpp
5. Domain d4zp1c1: 4zp1 C:2-187 [279095]
  Other proteins in same PDB: d4zp1a2, d4zp1b2, d4zp1c2, d4zp1d2
  automated match to d1zpda2
  complexed with gol, mg, ni, tpp
6. Domain d4zp1c3: 4zp1 C:363-566 [279097]
  Other proteins in same PDB: d4zp1a2, d4zp1b2, d4zp1c2, d4zp1d2
  automated match to d1zpda3
  complexed with gol, mg, ni, tpp
7. Domain d4zp1d1: 4zp1 D:2-187 [279085]
  Other proteins in same PDB: d4zp1a2, d4zp1b2, d4zp1c2, d4zp1d2
  automated match to d1zpda2
  complexed with gol, mg, ni, tpp
8. Domain d4zp1d3: 4zp1 D:363-566 [279088]
  Other proteins in same PDB: d4zp1a2, d4zp1b2, d4zp1c2, d4zp1d2
  automated match to d1zpda3
  complexed with gol, mg, ni, tpp

More info for Species Zymomonas mobilis [TaxId:542] from c.36.1.0 automated matches

Timeline for Species Zymomonas mobilis [TaxId:542] from c.36.1.0 automated matches:

Species Zymomonas mobilis [TaxId:542] from c.36.1.0 automated matches first appeared in SCOPe 2.04
Species Zymomonas mobilis [TaxId:542] from c.36.1.0 automated matches appears in SCOPe 2.06
Species Zymomonas mobilis [TaxId:542] from c.36.1.0 automated matches appears in the current release, SCOPe 2.08