Lineage for Species: Escherichia coli [TaxId: 562]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2108258Fold c.36: Thiamin diphosphate-binding fold (THDP-binding) [52517] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465
  4. 2108259Superfamily c.36.1: Thiamin diphosphate-binding fold (THDP-binding) [52518] (9 families) (S)
    there are two different functional modules of this fold: pyridine-binding (Pyr) and pyrophosphate-binding (PP) modules
    two Pyr and two PP modules assemble together in a conserved heterotetrameric core that binds two THDP coenzyme molecules
  5. 2108851Family c.36.1.0: automated matches [227300] (1 protein)
    not a true family
  6. 2108852Protein automated matches [227126] (20 species)
    not a true protein
  7. Species Escherichia coli [TaxId:562] [255574] (3 PDB entries)

PDB entries in Species: Escherichia coli [TaxId: 562]:

  1. Domain(s) for 2qta:
    1. 2108923Domain d2qtaa1: 2qta A:471-700 [151333]
      Other proteins in same PDB: d2qtaa2, d2qtaa3, d2qtab2, d2qtab3
      automated match to d2ieaa1
      complexed with mg, tdp; mutant
    2. 2108924Domain d2qtab1: 2qta B:471-700 [151336]
      Other proteins in same PDB: d2qtaa2, d2qtaa3, d2qtab2, d2qtab3
      automated match to d2ieaa1
      complexed with mg, tdp; mutant
  2. Domain(s) for 2qtc:
    1. 2108921Domain d2qtca1: 2qtc A:471-700 [151343]
      Other proteins in same PDB: d2qtca2, d2qtca3, d2qtcb2, d2qtcb3
      automated match to d2ieaa1
      complexed with mg, tdk; mutant
    2. 2108922Domain d2qtcb1: 2qtc B:471-700 [151346]
      Other proteins in same PDB: d2qtca2, d2qtca3, d2qtcb2, d2qtcb3
      automated match to d2ieaa1
      complexed with mg, tdk; mutant
  3. Domain(s) for 2r5n:
    1. 2108919Domain d2r5na1: 2r5n A:333-527 [151591]
      Other proteins in same PDB: d2r5na2, d2r5na3, d2r5na4, d2r5nb2, d2r5nb3, d2r5nb4
      automated match to d2r8oa1
      complexed with ca, edo, r5p, rp5, tpp
    2. 2108920Domain d2r5nb1: 2r5n B:333-527 [151594]
      Other proteins in same PDB: d2r5na2, d2r5na3, d2r5na4, d2r5nb2, d2r5nb3, d2r5nb4
      automated match to d2r8oa1
      complexed with ca, edo, r5p, rp5, tpp

More info for Species Escherichia coli [TaxId:562] from c.36.1.0 automated matches

Timeline for Species Escherichia coli [TaxId:562] from c.36.1.0 automated matches: