Lineage for Species: Desulfoarculus baarsii (Desulfovibrio baarsii) [TaxId: 887]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2031889Superfamily b.1.13: Superoxide reductase-like [49367] (2 families) (S)
  5. 2031890Family b.1.13.1: Superoxide reductase-like [49368] (3 protein domains)
    binds iron in the site that is topologically equivalent to the copper-binding site of cupredoxins
    automatically mapped to Pfam PF01880
  6. 2031913Protein automated matches [190694] (3 species)
    not a true protein
  7. 2031939Species Desulfoarculus baarsii (Desulfovibrio baarsii) [TaxId:887] [255263] (3 PDB entries)

PDB entries in Species: Desulfoarculus baarsii (Desulfovibrio baarsii) [TaxId: 887]:

  1. Domain(s) for 2ji1:
    1. 2031944Domain d2ji1a1: 2ji1 A:38-126 [138331]
      Other proteins in same PDB: d2ji1a2, d2ji1b2, d2ji1c2, d2ji1d2
      automated match to d1vzga1
      complexed with ca, fe, fe2
    2. 2031945Domain d2ji1b1: 2ji1 B:38-126 [138333]
      Other proteins in same PDB: d2ji1a2, d2ji1b2, d2ji1c2, d2ji1d2
      automated match to d1vzga1
      complexed with ca, fe, fe2
    3. 2031946Domain d2ji1c1: 2ji1 C:38-126 [138335]
      Other proteins in same PDB: d2ji1a2, d2ji1b2, d2ji1c2, d2ji1d2
      automated match to d1vzga1
      complexed with ca, fe, fe2
    4. 2031947Domain d2ji1d1: 2ji1 D:38-126 [138337]
      Other proteins in same PDB: d2ji1a2, d2ji1b2, d2ji1c2, d2ji1d2
      automated match to d1vzga1
      complexed with ca, fe, fe2
  2. Domain(s) for 2ji2:
    1. 2031940Domain d2ji2a1: 2ji2 A:38-126 [138339]
      Other proteins in same PDB: d2ji2a2, d2ji2b2, d2ji2c2, d2ji2d2
      automated match to d1vzga1
      complexed with ca, fe, fe2, no3; mutant
    2. 2031941Domain d2ji2b1: 2ji2 B:38-126 [138341]
      Other proteins in same PDB: d2ji2a2, d2ji2b2, d2ji2c2, d2ji2d2
      automated match to d1vzga1
      complexed with ca, fe, fe2, no3; mutant
    3. 2031942Domain d2ji2c1: 2ji2 C:38-126 [138343]
      Other proteins in same PDB: d2ji2a2, d2ji2b2, d2ji2c2, d2ji2d2
      automated match to d1vzga1
      complexed with ca, fe, fe2, no3; mutant
    4. 2031943Domain d2ji2d1: 2ji2 D:38-126 [138345]
      Other proteins in same PDB: d2ji2a2, d2ji2b2, d2ji2c2, d2ji2d2
      automated match to d1vzga1
      complexed with ca, fe, fe2, no3; mutant
  3. Domain(s) for 2ji3:
    1. 2031948Domain d2ji3a1: 2ji3 A:38-126 [138347]
      Other proteins in same PDB: d2ji3a2, d2ji3b2, d2ji3c2, d2ji3d2
      automated match to d1vzga1
      complexed with ca, fe, no3, per; mutant
    2. 2031949Domain d2ji3b1: 2ji3 B:38-126 [138349]
      Other proteins in same PDB: d2ji3a2, d2ji3b2, d2ji3c2, d2ji3d2
      automated match to d1vzga1
      complexed with ca, fe, no3, per; mutant
    3. 2031950Domain d2ji3c1: 2ji3 C:38-126 [138351]
      Other proteins in same PDB: d2ji3a2, d2ji3b2, d2ji3c2, d2ji3d2
      automated match to d1vzga1
      complexed with ca, fe, no3, per; mutant
    4. 2031951Domain d2ji3d1: 2ji3 D:38-126 [138353]
      Other proteins in same PDB: d2ji3a2, d2ji3b2, d2ji3c2, d2ji3d2
      automated match to d1vzga1
      complexed with ca, fe, no3, per; mutant

More info for Species Desulfoarculus baarsii (Desulfovibrio baarsii) [TaxId:887] from b.1.13.1 automated matches

Timeline for Species Desulfoarculus baarsii (Desulfovibrio baarsii) [TaxId:887] from b.1.13.1 automated matches: