Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2814470Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
    one turn of helix is made by two pairs of antiparallel strands linked with short turns
    has appearance of a sandwich of distinct architecture and jelly-roll topology
  4. 2815433Superfamily b.82.2: Clavaminate synthase-like [51197] (16 families) (S)
    Iron and ketoglutarate-dependent enzymes; elaborated version of this common fold
  5. 2816443Family b.82.2.15: proly-4-hydroxylase (P4H, PHD) like [254173] (3 proteins)
    Pfam PF13640; PubMed 16782814
  6. 2816451Protein automated matches [254532] (2 species)
    not a true protein
  7. 2816459Species Human (Homo sapiens) [TaxId:9606] [255179] (35 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 2g1m:
  2. Domain(s) for 2hbt:
  3. Domain(s) for 2hbu:
  4. Domain(s) for 2y33:
  5. Domain(s) for 2y34:
  6. Domain(s) for 3ouh:
  7. Domain(s) for 3oui:
  8. Domain(s) for 3ouj:
  9. Domain(s) for 4bqw:
  10. Domain(s) for 4bqx:
  11. Domain(s) for 4bqy:
  12. Domain(s) for 4jzr:
  13. Domain(s) for 4kbz:
  14. Domain(s) for 4uwd:
  15. Domain(s) for 5l9r:
    • 2816485Domain d5l9ra_: 5l9r A: [321987]
      automated match to d3ouja_
      protein/DNA complex; complexed with gol, mn, oga, pg4, so4
  16. Domain(s) for 5lat:
    • 2816490Domain d5lata_: 5lat A: [322108]
      automated match to d3ouja_
      protein/DNA complex; complexed with bct, gol, mn, un9
  17. Domain(s) for 5lb6:
    • 2816472Domain d5lb6a_: 5lb6 A: [322079]
      automated match to d3ouja_
      protein/DNA complex; complexed with gol, mn, so4, un9
  18. Domain(s) for 5lbb:
  19. Domain(s) for 5lbc:
    • 2816488Domain d5lbca_: 5lbc A: [321988]
      automated match to d3ouja_
      protein/DNA complex; complexed with bct, cl, gol, mn, so4, un9
  20. Domain(s) for 5lbe:
  21. Domain(s) for 5lbf:
    • 2816491Domain d5lbfa_: 5lbf A: [322019]
      automated match to d3ouja_
      protein/DNA complex; complexed with bct, mn, so4, un9
  22. Domain(s) for 5ox5:
  23. Domain(s) for 5ox6:
    • 2816493Domain d5ox6a_: 5ox6 A: [340285]
      automated match to d3ouja_
      protein/DNA complex; complexed with a1z, gol, mn, so4
  24. Domain(s) for 5v18:
  25. Domain(s) for 5v1b:
  26. Domain(s) for 6nmq:
  27. Domain(s) for 6qgv:
    • 2816460Domain d6qgva_: 6qgv A: [379811]
      automated match to d5lbba_
      protein/DNA complex; complexed with gol, ipa, j2h, mn, so4
  28. Domain(s) for 6st3:
    1. 2816501Domain d6st3a_: 6st3 A: [377835]
      automated match to d5lbba_
      protein/DNA complex; complexed with fmt, luw, mn
    2. 2816502Domain d6st3b_: 6st3 B: [377838]
      automated match to d5lbba_
      protein/DNA complex; complexed with fmt, luw, mn
  29. Domain(s) for 6yvt:
    1. 2816505Domain d6yvta_: 6yvt A: [386052]
      automated match to d3ouja_
      protein/DNA complex; complexed with gol, mn, pw2, so4
    2. 2816506Domain d6yvtb_: 6yvt B: [386059]
      automated match to d3ouja_
      protein/DNA complex; complexed with gol, mn, pw2, so4
    3. 2816507Domain d6yvtc_: 6yvt C: [386049]
      automated match to d3ouja_
      protein/DNA complex; complexed with gol, mn, pw2, so4
    4. 2816508Domain d6yvtd_: 6yvt D: [386043]
      automated match to d3ouja_
      protein/DNA complex; complexed with gol, mn, pw2, so4
    5. 2816509Domain d6yvte_: 6yvt E: [386075]
      automated match to d3ouja_
      protein/DNA complex; complexed with gol, mn, pw2, so4
    6. 2816510Domain d6yvtf_: 6yvt F: [386055]
      automated match to d3ouja_
      protein/DNA complex; complexed with gol, mn, pw2, so4
  30. Domain(s) for 6yvw:
  31. Domain(s) for 6yvx:
  32. Domain(s) for 6yvz:
  33. Domain(s) for 6yw0:
    • 2816492Domain d6yw0a_: 6yw0 A: [397941]
      automated match to d3ouja_
      protein/DNA complex; complexed with 2jp, bct, fe, mly
  34. Domain(s) for 6zbn:
    1. 2816475Domain d6zbna_: 6zbn A: [402915]
      automated match to d5lbba_
      complexed with gol, mn, qee
    2. 2816476Domain d6zbnb_: 6zbn B: [402893]
      automated match to d5lbba_
      complexed with gol, mn, qee
    3. 2816477Domain d6zbnc_: 6zbn C: [402889]
      automated match to d5lbba_
      complexed with gol, mn, qee
    4. 2816478Domain d6zbnd_: 6zbn D: [402913]
      automated match to d5lbba_
      complexed with gol, mn, qee
    5. 2816479Domain d6zbne_: 6zbn E: [402924]
      automated match to d5lbba_
      complexed with gol, mn, qee
    6. 2816480Domain d6zbnf_: 6zbn F: [402890]
      automated match to d5lbba_
      complexed with gol, mn, qee
  35. Domain(s) for 6zbo:
    1. 2816462Domain d6zboa_: 6zbo A: [402888]
      automated match to d5lbba_
      complexed with cl, mn, qeq
    2. 2816463Domain d6zbob_: 6zbo B: [402856]
      automated match to d5lbba_
      complexed with cl, mn, qeq
    3. 2816464Domain d6zboc_: 6zbo C: [402887]
      automated match to d5lbba_
      complexed with cl, mn, qeq
    4. 2816465Domain d6zbod_: 6zbo D: [402860]
      automated match to d5lbba_
      complexed with cl, mn, qeq
    5. 2816466Domain d6zboe_: 6zbo E: [402892]
      automated match to d5lbba_
      complexed with cl, mn, qeq
    6. 2816467Domain d6zbof_: 6zbo F: [402857]
      automated match to d5lbba_
      complexed with cl, mn, qeq

More info for Species Human (Homo sapiens) [TaxId:9606] from b.82.2.15 automated matches

Timeline for Species Human (Homo sapiens) [TaxId:9606] from b.82.2.15 automated matches: