SCOPe 2.08: Species: Grape (Vitis vinifera) [TaxId: 29760]

Lineage for Species: Grape (Vitis vinifera) [TaxId: 29760]

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
The nucleotide-binding modes of this and the next two folds/superfamilies are similar

Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)
Family c.2.1.0: automated matches [191313] (1 protein)
not a true family
Protein automated matches [190069] (319 species)
not a true protein
Species Grape (Vitis vinifera) [TaxId:29760] [255079] (11 PDB entries)

PDB entries in Species: Grape (Vitis vinifera) [TaxId: 29760]:

Domain(s) for 2c29:
1. Domain d2c29d_: 2c29 D: [241403]
  automated match to d2p4hx_
  complexed with dqh, nap
2. Domain d2c29f_: 2c29 F: [241404]
  automated match to d2p4hx_
  complexed with dqh, nap
Domain(s) for 2iod:
1. Domain d2ioda_: 2iod A: [242164]
  automated match to d2p4hx_
  complexed with myc, nap
2. Domain d2iodb_: 2iod B: [242165]
  automated match to d2p4hx_
  complexed with myc, nap
3. Domain d2iodc_: 2iod C: [242166]
  automated match to d2p4hx_
  complexed with myc, nap
4. Domain d2iodd_: 2iod D: [242167]
  automated match to d2p4hx_
  complexed with myc, nap
Domain(s) for 2nnl:
1. Domain d2nnld_: 2nnl D: [243198]
  automated match to d2p4hx_
  complexed with erd, nap
2. Domain d2nnlf_: 2nnl F: [243199]
  automated match to d2p4hx_
  complexed with erd, nap
Domain(s) for 2rh8:
- Domain d2rh8a_: 2rh8 A: [243680]
  automated match to d2p4hx_
  complexed with cl
Domain(s) for 3bxx:
1. Domain d3bxxa_: 3bxx A: [245398]
  automated match to d2p4hx_
  complexed with nap, que
2. Domain d3bxxb_: 3bxx B: [245399]
  automated match to d2p4hx_
  complexed with nap, que
3. Domain d3bxxc_: 3bxx C: [245400]
  automated match to d2p4hx_
  complexed with nap, que
4. Domain d3bxxd_: 3bxx D: [245401]
  automated match to d2p4hx_
  complexed with nap, que
5. Domain d3bxxe_: 3bxx E: [245402]
  automated match to d2p4hx_
  complexed with nap, que
6. Domain d3bxxf_: 3bxx F: [245403]
  automated match to d2p4hx_
  complexed with nap, que
Domain(s) for 3c1t:
1. Domain d3c1ta_: 3c1t A: [245436]
  automated match to d2p4hx_
  complexed with myc, nap
2. Domain d3c1tb_: 3c1t B: [245437]
  automated match to d2p4hx_
  complexed with myc, nap
3. Domain d3c1tc_: 3c1t C: [245438]
  automated match to d2p4hx_
  complexed with myc, nap
4. Domain d3c1td_: 3c1t D: [245439]
  automated match to d2p4hx_
  complexed with myc, nap
Domain(s) for 3hfs:
1. Domain d3hfsa_: 3hfs A: [246494]
  automated match to d2p4hx_
  complexed with cl
2. Domain d3hfsb_: 3hfs B: [246495]
  automated match to d2p4hx_
  complexed with cl
Domain(s) for 3i52:
- Domain d3i52a_: 3i52 A: [246713]
  automated match to d1qyca_
  complexed with kxn, nap
Domain(s) for 3i5m:
- Domain d3i5ma_: 3i5m A: [246720]
  automated match to d1qyca_
Domain(s) for 3i6i:
- Domain d3i6ia_: 3i6i A: [246743]
  automated match to d1qyca_
  complexed with acy, ndp
Domain(s) for 3i6q:
- Domain d3i6qa_: 3i6q A: [246744]
  automated match to d1qyca_
  complexed with ndp

More info for Species Grape (Vitis vinifera) [TaxId:29760] from c.2.1.0 automated matches

Timeline for Species Grape (Vitis vinifera) [TaxId:29760] from c.2.1.0 automated matches:

Species Grape (Vitis vinifera) [TaxId:29760] from c.2.1.0 automated matches first appeared in SCOPe 2.04
Species Grape (Vitis vinifera) [TaxId:29760] from c.2.1.0 automated matches appears in SCOPe 2.07