Lineage for Species: Thermus thermophilus [TaxId: 274]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1981147Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 1984585Superfamily a.4.13: Sigma3 and sigma4 domains of RNA polymerase sigma factors [88659] (4 families) (S)
  5. 1984684Family a.4.13.0: automated matches [254211] (1 protein)
    not a true family
  6. 1984685Protein automated matches [254475] (3 species)
    not a true protein
  7. Species Thermus thermophilus [TaxId:274] [255021] (2 PDB entries)

PDB entries in Species: Thermus thermophilus [TaxId: 274]:

  1. Domain(s) for 1zyr:
    1. 1984700Domain d1zyrf1: 1zyr F:258-318 [125856]
      Other proteins in same PDB: d1zyra1, d1zyra2, d1zyrb1, d1zyrb2, d1zyrc_, d1zyrd_, d1zyre_, d1zyrf3, d1zyrk1, d1zyrk2, d1zyrl1, d1zyrl2, d1zyrm_, d1zyrn_, d1zyro_, d1zyrp3
      automated match to d1smyf1
      protein/RNA complex; complexed with mg, std, zn
    2. 1984701Domain d1zyrf2: 1zyr F:319-423 [125857]
      Other proteins in same PDB: d1zyra1, d1zyra2, d1zyrb1, d1zyrb2, d1zyrc_, d1zyrd_, d1zyre_, d1zyrf3, d1zyrk1, d1zyrk2, d1zyrl1, d1zyrl2, d1zyrm_, d1zyrn_, d1zyro_, d1zyrp3
      automated match to d1smyf2
      protein/RNA complex; complexed with mg, std, zn
    3. 1984702Domain d1zyrp1: 1zyr P:258-318 [125866]
      Other proteins in same PDB: d1zyra1, d1zyra2, d1zyrb1, d1zyrb2, d1zyrc_, d1zyrd_, d1zyre_, d1zyrf3, d1zyrk1, d1zyrk2, d1zyrl1, d1zyrl2, d1zyrm_, d1zyrn_, d1zyro_, d1zyrp3
      automated match to d1smyf1
      protein/RNA complex; complexed with mg, std, zn
    4. 1984703Domain d1zyrp2: 1zyr P:319-423 [125867]
      Other proteins in same PDB: d1zyra1, d1zyra2, d1zyrb1, d1zyrb2, d1zyrc_, d1zyrd_, d1zyre_, d1zyrf3, d1zyrk1, d1zyrk2, d1zyrl1, d1zyrl2, d1zyrm_, d1zyrn_, d1zyro_, d1zyrp3
      automated match to d1smyf2
      protein/RNA complex; complexed with mg, std, zn
  2. Domain(s) for 5tmf:
    1. 2283209Domain d5tmff2: 5tmf F:258-318 [326510]
      Other proteins in same PDB: d5tmfc_, d5tmfd_, d5tmfe_, d5tmff1
      automated match to d1smyf1
      complexed with mg, ne6, po4, zn
    2. 2283210Domain d5tmff3: 5tmf F:319-423 [326511]
      Other proteins in same PDB: d5tmfc_, d5tmfd_, d5tmfe_, d5tmff1
      automated match to d1smyf2
      complexed with mg, ne6, po4, zn

More info for Species Thermus thermophilus [TaxId:274] from a.4.13.0 automated matches

Timeline for Species Thermus thermophilus [TaxId:274] from a.4.13.0 automated matches: