Lineage for Species: Lactobacillus plantarum [TaxId: 1590]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2108258Fold c.36: Thiamin diphosphate-binding fold (THDP-binding) [52517] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465
  4. 2108259Superfamily c.36.1: Thiamin diphosphate-binding fold (THDP-binding) [52518] (9 families) (S)
    there are two different functional modules of this fold: pyridine-binding (Pyr) and pyrophosphate-binding (PP) modules
    two Pyr and two PP modules assemble together in a conserved heterotetrameric core that binds two THDP coenzyme molecules
  5. 2108851Family c.36.1.0: automated matches [227300] (1 protein)
    not a true family
  6. 2108852Protein automated matches [227126] (20 species)
    not a true protein
  7. 2108944Species Lactobacillus plantarum [TaxId:1590] [254973] (6 PDB entries)

PDB entries in Species: Lactobacillus plantarum [TaxId: 1590]:

  1. Domain(s) for 1y9d:
    1. 2108965Domain d1y9da1: 1y9d A:9-182 [240982]
      Other proteins in same PDB: d1y9da2, d1y9db2, d1y9dc2, d1y9dd2
      automated match to d2ez9a2
      complexed with fad, mg, na, so4, tpp
    2. 2108966Domain d1y9da3: 1y9d A:366-593 [240984]
      Other proteins in same PDB: d1y9da2, d1y9db2, d1y9dc2, d1y9dd2
      automated match to d1powa3
      complexed with fad, mg, na, so4, tpp
    3. 2108967Domain d1y9db1: 1y9d B:9-182 [240985]
      Other proteins in same PDB: d1y9da2, d1y9db2, d1y9dc2, d1y9dd2
      automated match to d2ez9a2
      complexed with fad, mg, na, so4, tpp
    4. 2108968Domain d1y9db3: 1y9d B:366-597 [240987]
      Other proteins in same PDB: d1y9da2, d1y9db2, d1y9dc2, d1y9dd2
      automated match to d1powa3
      complexed with fad, mg, na, so4, tpp
    5. 2108969Domain d1y9dc1: 1y9d C:9-180 [240988]
      Other proteins in same PDB: d1y9da2, d1y9db2, d1y9dc2, d1y9dd2
      automated match to d2ez9a2
      complexed with fad, mg, na, so4, tpp
    6. 2108970Domain d1y9dc3: 1y9d C:366-593 [240990]
      Other proteins in same PDB: d1y9da2, d1y9db2, d1y9dc2, d1y9dd2
      automated match to d1powa3
      complexed with fad, mg, na, so4, tpp
    7. 2108971Domain d1y9dd1: 1y9d D:9-182 [240991]
      Other proteins in same PDB: d1y9da2, d1y9db2, d1y9dc2, d1y9dd2
      automated match to d2ez9a2
      complexed with fad, mg, na, so4, tpp
    8. 2108972Domain d1y9dd3: 1y9d D:366-593 [240993]
      Other proteins in same PDB: d1y9da2, d1y9db2, d1y9dc2, d1y9dd2
      automated match to d1powa3
      complexed with fad, mg, na, so4, tpp
  2. Domain(s) for 2ez4:
    1. 2108953Domain d2ez4a2: 2ez4 A:9-182 [132611]
      Other proteins in same PDB: d2ez4a1, d2ez4b1
      automated match to d2ez9a2
      complexed with fad, mg, na, po4, tpp
    2. 2108954Domain d2ez4a3: 2ez4 A:366-593 [132612]
      Other proteins in same PDB: d2ez4a1, d2ez4b1
      automated match to d1powa3
      complexed with fad, mg, na, po4, tpp
    3. 2108955Domain d2ez4b2: 2ez4 B:9-182 [132614]
      Other proteins in same PDB: d2ez4a1, d2ez4b1
      automated match to d2ez9a2
      complexed with fad, mg, na, po4, tpp
    4. 2108956Domain d2ez4b3: 2ez4 B:366-593 [132615]
      Other proteins in same PDB: d2ez4a1, d2ez4b1
      automated match to d1powa3
      complexed with fad, mg, na, po4, tpp
  3. Domain(s) for 2ez8:
    1. 2108949Domain d2ez8a2: 2ez8 A:9-182 [132622]
      Other proteins in same PDB: d2ez8a1, d2ez8b1
      automated match to d2ez9a2
      complexed with fad, mg, na, pyr, tdl
    2. 2108950Domain d2ez8a3: 2ez8 A:366-593 [132623]
      Other proteins in same PDB: d2ez8a1, d2ez8b1
      automated match to d1powa3
      complexed with fad, mg, na, pyr, tdl
    3. 2108951Domain d2ez8b2: 2ez8 B:9-182 [132625]
      Other proteins in same PDB: d2ez8a1, d2ez8b1
      automated match to d2ez9a2
      complexed with fad, mg, na, pyr, tdl
    4. 2108952Domain d2ez8b3: 2ez8 B:366-593 [132626]
      Other proteins in same PDB: d2ez8a1, d2ez8b1
      automated match to d1powa3
      complexed with fad, mg, na, pyr, tdl
  4. Domain(s) for 2ez9:
    1. 2108945Domain d2ez9a2: 2ez9 A:9-182 [132628]
      Other proteins in same PDB: d2ez9a1, d2ez9b1
      automated match to d2ez9a2
      complexed with fad, mg, na, tdk
    2. 2108946Domain d2ez9a3: 2ez9 A:366-593 [132629]
      Other proteins in same PDB: d2ez9a1, d2ez9b1
      automated match to d1powa3
      complexed with fad, mg, na, tdk
    3. 2108947Domain d2ez9b2: 2ez9 B:9-182 [132631]
      Other proteins in same PDB: d2ez9a1, d2ez9b1
      automated match to d2ez9a2
      complexed with fad, mg, na, tdk
    4. 2108948Domain d2ez9b3: 2ez9 B:366-593 [132632]
      Other proteins in same PDB: d2ez9a1, d2ez9b1
      automated match to d1powa3
      complexed with fad, mg, na, tdk
  5. Domain(s) for 2ezt:
    1. 2108961Domain d2ezta2: 2ezt A:9-182 [132634]
      Other proteins in same PDB: d2ezta1, d2eztb1
      automated match to d2ezua2
      complexed with fad, mg, na, po4, pyr, tdm
    2. 2108962Domain d2ezta3: 2ezt A:366-593 [132635]
      Other proteins in same PDB: d2ezta1, d2eztb1
      automated match to d1powa3
      complexed with fad, mg, na, po4, pyr, tdm
    3. 2108963Domain d2eztb2: 2ezt B:9-182 [132637]
      Other proteins in same PDB: d2ezta1, d2eztb1
      automated match to d2ezua2
      complexed with fad, mg, na, po4, pyr, tdm
    4. 2108964Domain d2eztb3: 2ezt B:366-593 [132638]
      Other proteins in same PDB: d2ezta1, d2eztb1
      automated match to d1powa3
      complexed with fad, mg, na, po4, pyr, tdm
  6. Domain(s) for 2ezu:
    1. 2108957Domain d2ezua2: 2ezu A:9-182 [132640]
      Other proteins in same PDB: d2ezua1, d2ezub1
      automated match to d2ezua2
      complexed with fad, htl, mg, na, pyr
    2. 2108958Domain d2ezua3: 2ezu A:366-593 [132641]
      Other proteins in same PDB: d2ezua1, d2ezub1
      automated match to d1powa3
      complexed with fad, htl, mg, na, pyr
    3. 2108959Domain d2ezub2: 2ezu B:9-182 [132643]
      Other proteins in same PDB: d2ezua1, d2ezub1
      automated match to d2ezua2
      complexed with fad, htl, mg, na, pyr
    4. 2108960Domain d2ezub3: 2ezu B:366-593 [132644]
      Other proteins in same PDB: d2ezua1, d2ezub1
      automated match to d1powa3
      complexed with fad, htl, mg, na, pyr

More info for Species Lactobacillus plantarum [TaxId:1590] from c.36.1.0 automated matches

Timeline for Species Lactobacillus plantarum [TaxId:1590] from c.36.1.0 automated matches: