Lineage for Species: Adeno-associated virus - 6 [TaxId: 68558]

  1. Root: SCOPe 2.06
  2. 2021373Class b: All beta proteins [48724] (177 folds)
  3. 2086376Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2087350Superfamily b.121.5: ssDNA viruses [88645] (3 families) (S)
  5. 2087369Family b.121.5.2: Parvoviridae-like VP [88646] (3 proteins)
    automatically mapped to Pfam PF00740
  6. 2087395Protein automated matches [190920] (7 species)
    not a true protein
  7. 2087408Species Adeno-associated virus - 6 [TaxId:68558] [254925] (5 PDB entries)

PDB entries in Species: Adeno-associated virus - 6 [TaxId: 68558]:

  1. Domain(s) for 1vu0:
    1. 2087410Domain d1vu0a_: 1vu0 a: [240809]
    2. 2087411Domain d1vu0b_: 1vu0 b: [240810]
    3. 2087412Domain d1vu0c_: 1vu0 c: [240811]
    4. 2087413Domain d1vu0d_: 1vu0 d: [240812]
    5. 2087414Domain d1vu0e_: 1vu0 e: [240813]
    6. 2087415Domain d1vu0f_: 1vu0 f: [240814]
    7. 2087416Domain d1vu0g_: 1vu0 g: [240815]
    8. 2087417Domain d1vu0h_: 1vu0 h: [240816]
    9. 2087418Domain d1vu0i_: 1vu0 i: [240817]
    10. 2087419Domain d1vu0j_: 1vu0 j: [240818]
    11. 2087420Domain d1vu0k_: 1vu0 k: [240819]
    12. 2087421Domain d1vu0l_: 1vu0 l: [240820]
    13. 2087422Domain d1vu0m_: 1vu0 m: [240821]
    14. 2087423Domain d1vu0n_: 1vu0 n: [240822]
    15. 2087424Domain d1vu0u_: 1vu0 U: [240823]
    16. 2087425Domain d1vu0v_: 1vu0 V: [240824]
    17. 2087426Domain d1vu0w_: 1vu0 W: [240825]
    18. 2087427Domain d1vu0x_: 1vu0 X: [240826]
    19. 2087428Domain d1vu0y_: 1vu0 Y: [240827]
    20. 2087429Domain d1vu0z_: 1vu0 Z: [240828]
  2. Domain(s) for 1vu1:
    1. 2087430Domain d1vu10_: 1vu1 0: [240829]
    2. 2087431Domain d1vu11_: 1vu1 1: [240830]
    3. 2087432Domain d1vu12_: 1vu1 2: [240831]
    4. 2087433Domain d1vu13_: 1vu1 3: [240832]
    5. 2087434Domain d1vu14_: 1vu1 4: [240833]
    6. 2087435Domain d1vu15_: 1vu1 5: [240834]
    7. 2087436Domain d1vu16_: 1vu1 6: [240835]
    8. 2087437Domain d1vu17_: 1vu1 7: [240836]
    9. 2087438Domain d1vu1o_: 1vu1 o: [240837]
    10. 2087439Domain d1vu1p_: 1vu1 p: [240838]
    11. 2087440Domain d1vu1q_: 1vu1 q: [240839]
    12. 2087441Domain d1vu1r_: 1vu1 r: [240840]
    13. 2087442Domain d1vu1s_: 1vu1 s: [240841]
    14. 2087443Domain d1vu1t_: 1vu1 t: [240842]
    15. 2087444Domain d1vu1u_: 1vu1 u: [240843]
    16. 2087445Domain d1vu1v_: 1vu1 v: [240844]
    17. 2087446Domain d1vu1w_: 1vu1 w: [240845]
    18. 2087447Domain d1vu1x_: 1vu1 x: [240846]
    19. 2087448Domain d1vu1y_: 1vu1 y: [240847]
    20. 2087449Domain d1vu1z_: 1vu1 z: [240848]
  3. Domain(s) for 3oah:
  4. Domain(s) for 3shm:
    1. 2087470Domain d3shma_: 3shm A: [249454]
      automated match to d1lp3a_
    2. 2087471Domain d3shmb_: 3shm B: [249455]
      automated match to d1lp3a_
    3. 2087472Domain d3shmc_: 3shm C: [249456]
      automated match to d1lp3a_
    4. 2087473Domain d3shmd_: 3shm D: [249457]
      automated match to d1lp3a_
    5. 2087474Domain d3shme_: 3shm E: [249458]
      automated match to d1lp3a_
    6. 2087475Domain d3shmf_: 3shm F: [249459]
      automated match to d1lp3a_
    7. 2087476Domain d3shmg_: 3shm G: [249460]
      automated match to d1lp3a_
    8. 2087477Domain d3shmh_: 3shm H: [249461]
      automated match to d1lp3a_
    9. 2087478Domain d3shmi_: 3shm I: [249462]
      automated match to d1lp3a_
    10. 2087479Domain d3shmj_: 3shm J: [249463]
      automated match to d1lp3a_
    11. 2087480Domain d3shmk_: 3shm K: [249464]
      automated match to d1lp3a_
    12. 2087481Domain d3shml_: 3shm L: [249465]
      automated match to d1lp3a_
    13. 2087482Domain d3shmm_: 3shm M: [249466]
      automated match to d1lp3a_
    14. 2087483Domain d3shmn_: 3shm N: [249467]
      automated match to d1lp3a_
    15. 2087484Domain d3shmo_: 3shm O: [249468]
      automated match to d1lp3a_
    16. 2087485Domain d3shmp_: 3shm P: [249469]
      automated match to d1lp3a_
    17. 2087486Domain d3shmq_: 3shm Q: [249470]
      automated match to d1lp3a_
    18. 2087487Domain d3shmr_: 3shm R: [249471]
      automated match to d1lp3a_
    19. 2087488Domain d3shms_: 3shm S: [249472]
      automated match to d1lp3a_
    20. 2087489Domain d3shmt_: 3shm T: [249473]
      automated match to d1lp3a_
  5. Domain(s) for 3tsx:
    1. 2087450Domain d3tsxa_: 3tsx A: [249999]
    2. 2087451Domain d3tsxb_: 3tsx B: [250000]
    3. 2087452Domain d3tsxc_: 3tsx C: [250001]
    4. 2087453Domain d3tsxd_: 3tsx D: [250002]
    5. 2087454Domain d3tsxe_: 3tsx E: [250003]
    6. 2087455Domain d3tsxf_: 3tsx F: [250004]
    7. 2087456Domain d3tsxg_: 3tsx G: [250005]
    8. 2087457Domain d3tsxh_: 3tsx H: [250006]
    9. 2087458Domain d3tsxi_: 3tsx I: [250007]
    10. 2087459Domain d3tsxj_: 3tsx J: [250008]
    11. 2087460Domain d3tsxk_: 3tsx K: [250009]
    12. 2087461Domain d3tsxl_: 3tsx L: [250010]
    13. 2087462Domain d3tsxm_: 3tsx M: [250011]
    14. 2087463Domain d3tsxn_: 3tsx N: [250012]
    15. 2087464Domain d3tsxo_: 3tsx O: [250013]
    16. 2087465Domain d3tsxp_: 3tsx P: [250014]
    17. 2087466Domain d3tsxq_: 3tsx Q: [250015]
    18. 2087467Domain d3tsxr_: 3tsx R: [250016]
    19. 2087468Domain d3tsxs_: 3tsx S: [250017]
    20. 2087469Domain d3tsxt_: 3tsx T: [250018]

More info for Species Adeno-associated virus - 6 [TaxId:68558] from b.121.5.2 automated matches

Timeline for Species Adeno-associated virus - 6 [TaxId:68558] from b.121.5.2 automated matches: