Lineage for Species: Adeno-associated virus - 6 [TaxId: 68558]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2075417Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2076263Superfamily b.121.5: ssDNA viruses [88645] (3 families) (S)
  5. 2076282Family b.121.5.2: Parvoviridae-like VP [88646] (3 protein domains)
    automatically mapped to Pfam PF00740
  6. 2076308Protein automated matches [190920] (7 species)
    not a true protein
  7. 2076320Species Adeno-associated virus - 6 [TaxId:68558] [254925] (5 PDB entries)

PDB entries in Species: Adeno-associated virus - 6 [TaxId: 68558]:

  1. Domain(s) for 1vu0:
    1. 2076322Domain d1vu0a_: 1vu0 a: [240809]
    2. 2076323Domain d1vu0b_: 1vu0 b: [240810]
    3. 2076324Domain d1vu0c_: 1vu0 c: [240811]
    4. 2076325Domain d1vu0d_: 1vu0 d: [240812]
    5. 2076326Domain d1vu0e_: 1vu0 e: [240813]
    6. 2076327Domain d1vu0f_: 1vu0 f: [240814]
    7. 2076328Domain d1vu0g_: 1vu0 g: [240815]
    8. 2076329Domain d1vu0h_: 1vu0 h: [240816]
    9. 2076330Domain d1vu0i_: 1vu0 i: [240817]
    10. 2076331Domain d1vu0j_: 1vu0 j: [240818]
    11. 2076332Domain d1vu0k_: 1vu0 k: [240819]
    12. 2076333Domain d1vu0l_: 1vu0 l: [240820]
    13. 2076334Domain d1vu0m_: 1vu0 m: [240821]
    14. 2076335Domain d1vu0n_: 1vu0 n: [240822]
    15. 2076336Domain d1vu0u_: 1vu0 U: [240823]
    16. 2076337Domain d1vu0v_: 1vu0 V: [240824]
    17. 2076338Domain d1vu0w_: 1vu0 W: [240825]
    18. 2076339Domain d1vu0x_: 1vu0 X: [240826]
    19. 2076340Domain d1vu0y_: 1vu0 Y: [240827]
    20. 2076341Domain d1vu0z_: 1vu0 Z: [240828]
  2. Domain(s) for 1vu1:
    1. 2076342Domain d1vu10_: 1vu1 0: [240829]
    2. 2076343Domain d1vu11_: 1vu1 1: [240830]
    3. 2076344Domain d1vu12_: 1vu1 2: [240831]
    4. 2076345Domain d1vu13_: 1vu1 3: [240832]
    5. 2076346Domain d1vu14_: 1vu1 4: [240833]
    6. 2076347Domain d1vu15_: 1vu1 5: [240834]
    7. 2076348Domain d1vu16_: 1vu1 6: [240835]
    8. 2076349Domain d1vu17_: 1vu1 7: [240836]
    9. 2076350Domain d1vu1o_: 1vu1 o: [240837]
    10. 2076351Domain d1vu1p_: 1vu1 p: [240838]
    11. 2076352Domain d1vu1q_: 1vu1 q: [240839]
    12. 2076353Domain d1vu1r_: 1vu1 r: [240840]
    13. 2076354Domain d1vu1s_: 1vu1 s: [240841]
    14. 2076355Domain d1vu1t_: 1vu1 t: [240842]
    15. 2076356Domain d1vu1u_: 1vu1 u: [240843]
    16. 2076357Domain d1vu1v_: 1vu1 v: [240844]
    17. 2076358Domain d1vu1w_: 1vu1 w: [240845]
    18. 2076359Domain d1vu1x_: 1vu1 x: [240846]
    19. 2076360Domain d1vu1y_: 1vu1 y: [240847]
    20. 2076361Domain d1vu1z_: 1vu1 z: [240848]
  3. Domain(s) for 3oah:
  4. Domain(s) for 3shm:
    1. 2076382Domain d3shma_: 3shm A: [249454]
      automated match to d1lp3a_
    2. 2076383Domain d3shmb_: 3shm B: [249455]
      automated match to d1lp3a_
    3. 2076384Domain d3shmc_: 3shm C: [249456]
      automated match to d1lp3a_
    4. 2076385Domain d3shmd_: 3shm D: [249457]
      automated match to d1lp3a_
    5. 2076386Domain d3shme_: 3shm E: [249458]
      automated match to d1lp3a_
    6. 2076387Domain d3shmf_: 3shm F: [249459]
      automated match to d1lp3a_
    7. 2076388Domain d3shmg_: 3shm G: [249460]
      automated match to d1lp3a_
    8. 2076389Domain d3shmh_: 3shm H: [249461]
      automated match to d1lp3a_
    9. 2076390Domain d3shmi_: 3shm I: [249462]
      automated match to d1lp3a_
    10. 2076391Domain d3shmj_: 3shm J: [249463]
      automated match to d1lp3a_
    11. 2076392Domain d3shmk_: 3shm K: [249464]
      automated match to d1lp3a_
    12. 2076393Domain d3shml_: 3shm L: [249465]
      automated match to d1lp3a_
    13. 2076394Domain d3shmm_: 3shm M: [249466]
      automated match to d1lp3a_
    14. 2076395Domain d3shmn_: 3shm N: [249467]
      automated match to d1lp3a_
    15. 2076396Domain d3shmo_: 3shm O: [249468]
      automated match to d1lp3a_
    16. 2076397Domain d3shmp_: 3shm P: [249469]
      automated match to d1lp3a_
    17. 2076398Domain d3shmq_: 3shm Q: [249470]
      automated match to d1lp3a_
    18. 2076399Domain d3shmr_: 3shm R: [249471]
      automated match to d1lp3a_
    19. 2076400Domain d3shms_: 3shm S: [249472]
      automated match to d1lp3a_
    20. 2076401Domain d3shmt_: 3shm T: [249473]
      automated match to d1lp3a_
  5. Domain(s) for 3tsx:
    1. 2076362Domain d3tsxa_: 3tsx A: [249999]
    2. 2076363Domain d3tsxb_: 3tsx B: [250000]
    3. 2076364Domain d3tsxc_: 3tsx C: [250001]
    4. 2076365Domain d3tsxd_: 3tsx D: [250002]
    5. 2076366Domain d3tsxe_: 3tsx E: [250003]
    6. 2076367Domain d3tsxf_: 3tsx F: [250004]
    7. 2076368Domain d3tsxg_: 3tsx G: [250005]
    8. 2076369Domain d3tsxh_: 3tsx H: [250006]
    9. 2076370Domain d3tsxi_: 3tsx I: [250007]
    10. 2076371Domain d3tsxj_: 3tsx J: [250008]
    11. 2076372Domain d3tsxk_: 3tsx K: [250009]
    12. 2076373Domain d3tsxl_: 3tsx L: [250010]
    13. 2076374Domain d3tsxm_: 3tsx M: [250011]
    14. 2076375Domain d3tsxn_: 3tsx N: [250012]
    15. 2076376Domain d3tsxo_: 3tsx O: [250013]
    16. 2076377Domain d3tsxp_: 3tsx P: [250014]
    17. 2076378Domain d3tsxq_: 3tsx Q: [250015]
    18. 2076379Domain d3tsxr_: 3tsx R: [250016]
    19. 2076380Domain d3tsxs_: 3tsx S: [250017]
    20. 2076381Domain d3tsxt_: 3tsx T: [250018]

More info for Species Adeno-associated virus - 6 [TaxId:68558] from b.121.5.2 automated matches

Timeline for Species Adeno-associated virus - 6 [TaxId:68558] from b.121.5.2 automated matches: