Lineage for Species: Adeno-associated virus - 6 [TaxId: 68558]

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2821496Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2823004Superfamily b.121.5: ssDNA viruses [88645] (4 families) (S)
  5. 2823027Family b.121.5.2: Parvoviridae-like VP [88646] (3 proteins)
    automatically mapped to Pfam PF00740
  6. 2823053Protein automated matches [190920] (12 species)
    not a true protein
  7. 2823072Species Adeno-associated virus - 6 [TaxId:68558] [254925] (5 PDB entries)

PDB entries in Species: Adeno-associated virus - 6 [TaxId: 68558]:

  1. Domain(s) for 1vu0:
    1. 2823094Domain d1vu0a_: 1vu0 a: [240809]
    2. 2823095Domain d1vu0b_: 1vu0 b: [240810]
    3. 2823096Domain d1vu0c_: 1vu0 c: [240811]
    4. 2823097Domain d1vu0d_: 1vu0 d: [240812]
    5. 2823098Domain d1vu0e_: 1vu0 e: [240813]
    6. 2823099Domain d1vu0f_: 1vu0 f: [240814]
    7. 2823100Domain d1vu0g_: 1vu0 g: [240815]
    8. 2823101Domain d1vu0h_: 1vu0 h: [240816]
    9. 2823102Domain d1vu0i_: 1vu0 i: [240817]
    10. 2823103Domain d1vu0j_: 1vu0 j: [240818]
    11. 2823104Domain d1vu0k_: 1vu0 k: [240819]
    12. 2823105Domain d1vu0l_: 1vu0 l: [240820]
    13. 2823106Domain d1vu0m_: 1vu0 m: [240821]
    14. 2823107Domain d1vu0n_: 1vu0 n: [240822]
    15. 2823108Domain d1vu0u_: 1vu0 U: [240823]
    16. 2823109Domain d1vu0v_: 1vu0 V: [240824]
    17. 2823110Domain d1vu0w_: 1vu0 W: [240825]
    18. 2823111Domain d1vu0x_: 1vu0 X: [240826]
    19. 2823112Domain d1vu0y_: 1vu0 Y: [240827]
    20. 2823113Domain d1vu0z_: 1vu0 Z: [240828]
  2. Domain(s) for 1vu1:
    1. 2823114Domain d1vu10_: 1vu1 0: [240829]
    2. 2823115Domain d1vu11_: 1vu1 1: [240830]
    3. 2823116Domain d1vu12_: 1vu1 2: [240831]
    4. 2823117Domain d1vu13_: 1vu1 3: [240832]
    5. 2823118Domain d1vu14_: 1vu1 4: [240833]
    6. 2823119Domain d1vu15_: 1vu1 5: [240834]
    7. 2823120Domain d1vu16_: 1vu1 6: [240835]
    8. 2823121Domain d1vu17_: 1vu1 7: [240836]
    9. 2823122Domain d1vu1o_: 1vu1 o: [240837]
    10. 2823123Domain d1vu1p_: 1vu1 p: [240838]
    11. 2823124Domain d1vu1q_: 1vu1 q: [240839]
    12. 2823125Domain d1vu1r_: 1vu1 r: [240840]
    13. 2823126Domain d1vu1s_: 1vu1 s: [240841]
    14. 2823127Domain d1vu1t_: 1vu1 t: [240842]
    15. 2823128Domain d1vu1u_: 1vu1 u: [240843]
    16. 2823129Domain d1vu1v_: 1vu1 v: [240844]
    17. 2823130Domain d1vu1w_: 1vu1 w: [240845]
    18. 2823131Domain d1vu1x_: 1vu1 x: [240846]
    19. 2823132Domain d1vu1y_: 1vu1 y: [240847]
    20. 2823133Domain d1vu1z_: 1vu1 z: [240848]
  3. Domain(s) for 3oah:
  4. Domain(s) for 3shm:
    1. 2823074Domain d3shma_: 3shm A: [249454]
      automated match to d1lp3a_
    2. 2823075Domain d3shmb_: 3shm B: [249455]
      automated match to d1lp3a_
    3. 2823076Domain d3shmc_: 3shm C: [249456]
      automated match to d1lp3a_
    4. 2823077Domain d3shmd_: 3shm D: [249457]
      automated match to d1lp3a_
    5. 2823078Domain d3shme_: 3shm E: [249458]
      automated match to d1lp3a_
    6. 2823079Domain d3shmf_: 3shm F: [249459]
      automated match to d1lp3a_
    7. 2823080Domain d3shmg_: 3shm G: [249460]
      automated match to d1lp3a_
    8. 2823081Domain d3shmh_: 3shm H: [249461]
      automated match to d1lp3a_
    9. 2823082Domain d3shmi_: 3shm I: [249462]
      automated match to d1lp3a_
    10. 2823083Domain d3shmj_: 3shm J: [249463]
      automated match to d1lp3a_
    11. 2823084Domain d3shmk_: 3shm K: [249464]
      automated match to d1lp3a_
    12. 2823085Domain d3shml_: 3shm L: [249465]
      automated match to d1lp3a_
    13. 2823086Domain d3shmm_: 3shm M: [249466]
      automated match to d1lp3a_
    14. 2823087Domain d3shmn_: 3shm N: [249467]
      automated match to d1lp3a_
    15. 2823088Domain d3shmo_: 3shm O: [249468]
      automated match to d1lp3a_
    16. 2823089Domain d3shmp_: 3shm P: [249469]
      automated match to d1lp3a_
    17. 2823090Domain d3shmq_: 3shm Q: [249470]
      automated match to d1lp3a_
    18. 2823091Domain d3shmr_: 3shm R: [249471]
      automated match to d1lp3a_
    19. 2823092Domain d3shms_: 3shm S: [249472]
      automated match to d1lp3a_
    20. 2823093Domain d3shmt_: 3shm T: [249473]
      automated match to d1lp3a_
  5. Domain(s) for 3tsx:
    1. 2823134Domain d3tsxa_: 3tsx A: [249999]
    2. 2823135Domain d3tsxb_: 3tsx B: [250000]
    3. 2823136Domain d3tsxc_: 3tsx C: [250001]
    4. 2823137Domain d3tsxd_: 3tsx D: [250002]
    5. 2823138Domain d3tsxe_: 3tsx E: [250003]
    6. 2823139Domain d3tsxf_: 3tsx F: [250004]
    7. 2823140Domain d3tsxg_: 3tsx G: [250005]
    8. 2823141Domain d3tsxh_: 3tsx H: [250006]
    9. 2823142Domain d3tsxi_: 3tsx I: [250007]
    10. 2823143Domain d3tsxj_: 3tsx J: [250008]
    11. 2823144Domain d3tsxk_: 3tsx K: [250009]
    12. 2823145Domain d3tsxl_: 3tsx L: [250010]
    13. 2823146Domain d3tsxm_: 3tsx M: [250011]
    14. 2823147Domain d3tsxn_: 3tsx N: [250012]
    15. 2823148Domain d3tsxo_: 3tsx O: [250013]
    16. 2823149Domain d3tsxp_: 3tsx P: [250014]
    17. 2823150Domain d3tsxq_: 3tsx Q: [250015]
    18. 2823151Domain d3tsxr_: 3tsx R: [250016]
    19. 2823152Domain d3tsxs_: 3tsx S: [250017]
    20. 2823153Domain d3tsxt_: 3tsx T: [250018]

More info for Species Adeno-associated virus - 6 [TaxId:68558] from b.121.5.2 automated matches

Timeline for Species Adeno-associated virus - 6 [TaxId:68558] from b.121.5.2 automated matches: