SCOPe 2.08: Species: Thermoactinomyces vulgaris [TaxId: 2026]

Lineage for Species: Thermoactinomyces vulgaris [TaxId: 2026]

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
members of the family may contain various insert subdomains
in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain

Protein automated matches [190099] (31 species)
not a true protein
Species Thermoactinomyces vulgaris [TaxId:2026] [254920] (8 PDB entries)

PDB entries in Species: Thermoactinomyces vulgaris [TaxId: 2026]:

Domain(s) for 1vfm:
1. Domain d1vfma3: 1vfm A:121-502 [120044]
  Other proteins in same PDB: d1vfma1, d1vfma2, d1vfmb1, d1vfmb2
  automated match to d1ji2a3
  complexed with ca
2. Domain d1vfmb3: 1vfm B:121-502 [120047]
  Other proteins in same PDB: d1vfma1, d1vfma2, d1vfmb1, d1vfmb2
  automated match to d1ji2a3
  complexed with ca
Domain(s) for 1vfo:
1. Domain d1vfoa3: 1vfo A:121-502 [120050]
  Other proteins in same PDB: d1vfoa1, d1vfoa2, d1vfob1, d1vfob2
  automated match to d1ji2a3
  complexed with ca
2. Domain d1vfob3: 1vfo B:121-502 [120053]
  Other proteins in same PDB: d1vfoa1, d1vfoa2, d1vfob1, d1vfob2
  automated match to d1ji2a3
  complexed with ca
Domain(s) for 1vfu:
1. Domain d1vfua3: 1vfu A:121-502 [120057]
  Other proteins in same PDB: d1vfua1, d1vfua2, d1vfub1, d1vfub2
  automated match to d1ji2a3
  complexed with ca
2. Domain d1vfub3: 1vfu B:121-502 [120060]
  Other proteins in same PDB: d1vfua1, d1vfua2, d1vfub1, d1vfub2
  automated match to d1ji2a3
  complexed with ca
Domain(s) for 1wzk:
1. Domain d1wzka3: 1wzk A:121-502 [121509]
  Other proteins in same PDB: d1wzka1, d1wzka2, d1wzkb1, d1wzkb2
  automated match to d1ji2a3
  complexed with ca
2. Domain d1wzkb3: 1wzk B:121-502 [121512]
  Other proteins in same PDB: d1wzka1, d1wzka2, d1wzkb1, d1wzkb2
  automated match to d1ji2a3
  complexed with ca
Domain(s) for 1wzl:
1. Domain d1wzla3: 1wzl A:121-502 [121515]
  Other proteins in same PDB: d1wzla1, d1wzla2, d1wzlb1, d1wzlb2
  automated match to d1ji2a3
  complexed with ca
2. Domain d1wzlb3: 1wzl B:121-502 [121518]
  Other proteins in same PDB: d1wzla1, d1wzla2, d1wzlb1, d1wzlb2
  automated match to d1ji2a3
  complexed with ca
Domain(s) for 2d0f:
- Domain d2d0fa3: 2d0f A:123-554 [131066]
  Other proteins in same PDB: d2d0fa1, d2d0fa2
  automated match to d1ji1a3
  complexed with ca, mpd; mutant
Domain(s) for 5z0t:
1. Domain d5z0ta2: 5z0t A:123-554 [349129]
  Other proteins in same PDB: d5z0ta1, d5z0ta3, d5z0tb1, d5z0tb3
  automated match to d1ji1a3
  complexed with ca, mpd; mutant
2. Domain d5z0tb2: 5z0t B:123-554 [349350]
  Other proteins in same PDB: d5z0ta1, d5z0ta3, d5z0tb1, d5z0tb3
  automated match to d1ji1a3
  complexed with ca, mpd; mutant
Domain(s) for 5z0u:
- Domain d5z0ua2: 5z0u A:123-554 [349359]
  Other proteins in same PDB: d5z0ua1, d5z0ua3
  automated match to d1ji1a3
  complexed with ca, mpd; mutant

More info for Species Thermoactinomyces vulgaris [TaxId:2026] from c.1.8.1 automated matches

Timeline for Species Thermoactinomyces vulgaris [TaxId:2026] from c.1.8.1 automated matches:

Species Thermoactinomyces vulgaris [TaxId:2026] from c.1.8.1 automated matches first appeared in SCOPe 2.04
Species Thermoactinomyces vulgaris [TaxId:2026] from c.1.8.1 automated matches appears in SCOPe 2.07