Lineage for Species: Influenza A virus [TaxId: 93838]

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2459948Fold c.52: Restriction endonuclease-like [52979] (4 superfamilies)
    core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest
  4. 2459949Superfamily c.52.1: Restriction endonuclease-like [52980] (37 families) (S)
  5. 2460385Family c.52.1.34: PA N-terminal domain [254166] (2 protein domains)
    Pfam PF00603; relationship to endonucleases discussed in PubMed 19194458
  6. 2460386Protein PA N-terminal domain [254375] (5 species)
  7. 2460409Species Influenza A virus [TaxId:93838] [254808] (60 PDB entries)

PDB entries in Species: Influenza A virus [TaxId: 93838]:

  1. Domain(s) for 3ebj:
    1. 2460424Domain d3ebja1: 3ebj A:1-197 [245817]
      Other proteins in same PDB: d3ebja2, d3ebjb2, d3ebjc2, d3ebjd2
      complexed with mg
    2. 2460425Domain d3ebjb1: 3ebj B:1-195 [245818]
      Other proteins in same PDB: d3ebja2, d3ebjb2, d3ebjc2, d3ebjd2
      complexed with mg
    3. 2460426Domain d3ebjc1: 3ebj C:1-197 [245819]
      Other proteins in same PDB: d3ebja2, d3ebjb2, d3ebjc2, d3ebjd2
      complexed with mg
    4. 2460427Domain d3ebjd1: 3ebj D:1-197 [245820]
      Other proteins in same PDB: d3ebja2, d3ebjb2, d3ebjc2, d3ebjd2
      complexed with mg
  2. Domain(s) for 3hw3:
    1. 2460418Domain d3hw3a1: 3hw3 A:1-198 [246582]
      Other proteins in same PDB: d3hw3a2, d3hw3b2, d3hw3c2, d3hw3d2
      automated match to d3ebja_
      complexed with mg, u5p
    2. 2460419Domain d3hw3b1: 3hw3 B:1-197 [246583]
      Other proteins in same PDB: d3hw3a2, d3hw3b2, d3hw3c2, d3hw3d2
      automated match to d3ebja_
      complexed with mg, u5p
    3. 2460420Domain d3hw3c1: 3hw3 C:1-197 [246584]
      Other proteins in same PDB: d3hw3a2, d3hw3b2, d3hw3c2, d3hw3d2
      automated match to d3ebja_
      complexed with mg, u5p
    4. 2460421Domain d3hw3d1: 3hw3 D:1-197 [246585]
      Other proteins in same PDB: d3hw3a2, d3hw3b2, d3hw3c2, d3hw3d2
      automated match to d3ebja_
      complexed with mg, u5p
  3. Domain(s) for 3hw4:
    1. 2460414Domain d3hw4a1: 3hw4 A:1-198 [246586]
      Other proteins in same PDB: d3hw4a2, d3hw4b2, d3hw4c2, d3hw4d2
      automated match to d3ebja_
      complexed with mg, tmp
    2. 2460415Domain d3hw4b1: 3hw4 B:1-197 [246587]
      Other proteins in same PDB: d3hw4a2, d3hw4b2, d3hw4c2, d3hw4d2
      automated match to d3ebja_
      complexed with mg, tmp
    3. 2460416Domain d3hw4c1: 3hw4 C:1-197 [246588]
      Other proteins in same PDB: d3hw4a2, d3hw4b2, d3hw4c2, d3hw4d2
      automated match to d3ebja_
      complexed with mg, tmp
    4. 2460417Domain d3hw4d1: 3hw4 D:1-197 [246589]
      Other proteins in same PDB: d3hw4a2, d3hw4b2, d3hw4c2, d3hw4d2
      automated match to d3ebja_
      complexed with mg, tmp
  4. Domain(s) for 3hw5:
    1. 2460410Domain d3hw5a1: 3hw5 A:1-198 [246590]
      Other proteins in same PDB: d3hw5a2, d3hw5b2, d3hw5c2, d3hw5d2
      automated match to d3ebja_
      complexed with amp, mg
    2. 2460411Domain d3hw5b1: 3hw5 B:1-197 [246591]
      Other proteins in same PDB: d3hw5a2, d3hw5b2, d3hw5c2, d3hw5d2
      automated match to d3ebja_
      complexed with amp, mg
    3. 2460412Domain d3hw5c1: 3hw5 C:1-197 [246592]
      Other proteins in same PDB: d3hw5a2, d3hw5b2, d3hw5c2, d3hw5d2
      automated match to d3ebja_
      complexed with amp, mg
    4. 2460413Domain d3hw5d1: 3hw5 D:1-197 [246593]
      Other proteins in same PDB: d3hw5a2, d3hw5b2, d3hw5c2, d3hw5d2
      automated match to d3ebja_
      complexed with amp, mg
  5. Domain(s) for 3hw6:
    1. 2460453Domain d3hw6a1: 3hw6 A:1-197 [246594]
      Other proteins in same PDB: d3hw6a2, d3hw6b2, d3hw6c2, d3hw6d2
      automated match to d3ebja_
      complexed with mn
    2. 2460454Domain d3hw6b1: 3hw6 B:1-197 [246595]
      Other proteins in same PDB: d3hw6a2, d3hw6b2, d3hw6c2, d3hw6d2
      automated match to d3ebja_
      complexed with mn
    3. 2460455Domain d3hw6c1: 3hw6 C:1-197 [246596]
      Other proteins in same PDB: d3hw6a2, d3hw6b2, d3hw6c2, d3hw6d2
      automated match to d3ebja_
      complexed with mn
    4. 2460456Domain d3hw6d1: 3hw6 D:1-197 [246597]
      Other proteins in same PDB: d3hw6a2, d3hw6b2, d3hw6c2, d3hw6d2
      automated match to d3ebja_
      complexed with mn
  6. Domain(s) for 4e5e:
    1. 2460431Domain d4e5ea_: 4e5e A: [251665]
      automated match to d3ebja_
      complexed with mn, so4
    2. 2460432Domain d4e5eb_: 4e5e B: [251666]
      automated match to d3ebja_
      complexed with mn, so4
    3. 2460433Domain d4e5ec_: 4e5e C: [251667]
      automated match to d3ebja_
      complexed with mn, so4
    4. 2460434Domain d4e5ed_: 4e5e D: [251668]
      automated match to d3ebja_
      complexed with mn, so4
  7. Domain(s) for 4e5f:
    1. 2460457Domain d4e5fa_: 4e5f A: [251669]
      automated match to d3ebja_
      complexed with 0n7, mn, so4
    2. 2460458Domain d4e5fb_: 4e5f B: [251670]
      automated match to d3ebja_
      complexed with 0n7, mn, so4
    3. 2460459Domain d4e5fc_: 4e5f C: [251671]
      automated match to d3ebja_
      complexed with 0n7, mn, so4
    4. 2460460Domain d4e5fd_: 4e5f D: [251672]
      automated match to d3ebja_
      complexed with 0n7, mn, so4
  8. Domain(s) for 4e5g:
    1. 2460466Domain d4e5ga_: 4e5g A: [251673]
      automated match to d3ebja_
      complexed with mn, so4, xi7
    2. 2460467Domain d4e5gb_: 4e5g B: [251674]
      automated match to d3ebja_
      complexed with mn, so4, xi7
    3. 2460468Domain d4e5gc_: 4e5g C: [251675]
      automated match to d3ebja_
      complexed with mn, so4, xi7
    4. 2460469Domain d4e5gd_: 4e5g D: [251676]
      automated match to d3ebja_
      complexed with mn, so4, xi7
  9. Domain(s) for 4e5h:
    1. 2460442Domain d4e5ha_: 4e5h A: [251677]
      automated match to d3ebja_
      complexed with 0n8, mn, so4
    2. 2460443Domain d4e5hb_: 4e5h B: [251678]
      automated match to d3ebja_
      complexed with 0n8, mn, so4
    3. 2460444Domain d4e5hc_: 4e5h C: [251679]
      automated match to d3ebja_
      complexed with 0n8, mn, so4
    4. 2460445Domain d4e5hd_: 4e5h D: [251680]
      automated match to d3ebja_
      complexed with 0n8, mn, so4
  10. Domain(s) for 4e5i:
    1. 2460475Domain d4e5ia_: 4e5i A: [251681]
      automated match to d3ebja_
      complexed with 0n9, mn, so4
    2. 2460476Domain d4e5ib_: 4e5i B: [251682]
      automated match to d3ebja_
      complexed with 0n9, mn, so4
    3. 2460477Domain d4e5ic_: 4e5i C: [251683]
      automated match to d3ebja_
      complexed with 0n9, mn, so4
    4. 2460478Domain d4e5id_: 4e5i D: [251684]
      automated match to d3ebja_
      complexed with 0n9, mn, so4
  11. Domain(s) for 4e5j:
    1. 2460449Domain d4e5ja1: 4e5j A:1-199 [251685]
      Other proteins in same PDB: d4e5ja2
      automated match to d3ebja_
      complexed with 581, mn, so4
    2. 2460450Domain d4e5jb_: 4e5j B: [251686]
      Other proteins in same PDB: d4e5ja2
      automated match to d3ebja_
      complexed with 581, mn, so4
    3. 2460451Domain d4e5jc_: 4e5j C: [251687]
      Other proteins in same PDB: d4e5ja2
      automated match to d3ebja_
      complexed with 581, mn, so4
    4. 2460452Domain d4e5jd_: 4e5j D: [251688]
      Other proteins in same PDB: d4e5ja2
      automated match to d3ebja_
      complexed with 581, mn, so4
  12. Domain(s) for 4e5l:
    1. 2460461Domain d4e5la_: 4e5l A: [251689]
      automated match to d3ebja_
      complexed with dbh, mn, so4
    2. 2460462Domain d4e5lb_: 4e5l B: [251690]
      automated match to d3ebja_
      complexed with dbh, mn, so4
    3. 2460463Domain d4e5lc_: 4e5l C: [251691]
      automated match to d3ebja_
      complexed with dbh, mn, so4
    4. 2460464Domain d4e5ld_: 4e5l D: [251692]
      automated match to d3ebja_
      complexed with dbh, mn, so4
  13. Domain(s) for 4nfz:
    1. 2460472Domain d4nfza_: 4nfz A: [253949]
      automated match to d3ebja_
      complexed with mn
    2. 2460473Domain d4nfzb_: 4nfz B: [253950]
      automated match to d3ebja_
      complexed with mn
    3. 2460474Domain d4nfzc_: 4nfz C: [253951]
      automated match to d3ebja_
      complexed with mn
  14. Domain(s) for 5ccy:
  15. Domain(s) for 5cgv:
  16. Domain(s) for 5cl0:
  17. Domain(s) for 5czn:
  18. Domain(s) for 5d2o:
  19. Domain(s) for 5d42:
  20. Domain(s) for 5d4g:
  21. Domain(s) for 5d8u:
  22. Domain(s) for 5d9j:
  23. Domain(s) for 5dbs:
  24. Domain(s) for 5deb:
  25. Domain(s) for 5des:
  26. Domain(s) for 5ega:
  27. Domain(s) for 5fdd:
  28. Domain(s) for 5fdg:
  29. Domain(s) for 5jht:
  30. Domain(s) for 5jhv:
    1. 2460470Domain d5jhva1: 5jhv A:1-196 [317271]
      Other proteins in same PDB: d5jhva2, d5jhvb2
      automated match to d4e5ed_
      complexed with mn
    2. 2460471Domain d5jhvb1: 5jhv B:1-196 [317282]
      Other proteins in same PDB: d5jhva2, d5jhvb2
      automated match to d4e5ed_
      complexed with mn
  31. Domain(s) for 5vp8:
  32. Domain(s) for 5vpt:
  33. Domain(s) for 5vpx:
  34. Domain(s) for 5vqn:
  35. Domain(s) for 5vrj:
  36. Domain(s) for 5w3i:
  37. Domain(s) for 5w44:
  38. Domain(s) for 5w73:
  39. Domain(s) for 5w7u:
  40. Domain(s) for 5w92:
  41. Domain(s) for 5w9g:
  42. Domain(s) for 5wa6:
  43. Domain(s) for 5wa7:
  44. Domain(s) for 5wap:
  45. Domain(s) for 5wb3:
  46. Domain(s) for 5wcs:
  47. Domain(s) for 5wct:
  48. Domain(s) for 5wdc:
  49. Domain(s) for 5wdn:
  50. Domain(s) for 5wdw:
  51. Domain(s) for 5we7:
  52. Domain(s) for 5we9:
  53. Domain(s) for 5web:
  54. Domain(s) for 5wef:
  55. Domain(s) for 5wei:
  56. Domain(s) for 5wf3:
  57. Domain(s) for 5wfm:
  58. Domain(s) for 5wfw:
  59. Domain(s) for 5wfz:
  60. Domain(s) for 5wg9:

More info for Species Influenza A virus [TaxId:93838] from c.52.1.34 PA N-terminal domain

Timeline for Species Influenza A virus [TaxId:93838] from c.52.1.34 PA N-terminal domain: