Lineage for Species: Human (Homo sapiens) [TaxId: 9606]
- Root: SCOPe 2.07
Class b: All beta proteins [48724] (178 folds) 
Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
one turn of helix is made by two pairs of antiparallel strands linked with short turns
has appearance of a sandwich of distinct architecture and jelly-roll topology
Superfamily b.82.2: Clavaminate synthase-like [51197] (16 families) 
Iron and ketoglutarate-dependent enzymes; elaborated version of this common fold
Family b.82.2.14: Histone demethylase core [254153] (4 proteins)
Jumonji domain; Pfam PF02375 (JmjN) and Pfam PF02373 (JmjC); relationship to FIH1 (b.82.2.6) described in PubMed 16983801
Protein JMJD2D core [254343] (1 species) Species Human (Homo sapiens) [TaxId:9606] [254776] (22 PDB entries)
PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:
- Domain(s) for 3dxu:
Domain d3dxua_: 3dxu A: [245672]
complexed with fe2, gol, oga, so4, zn
- Domain(s) for 4hoo:
Domain d4hooa_: 4hoo A: [252476]
automated match to d3dxua_
complexed with act, ni, zn
Domain d4hoob_: 4hoo B: [252477]
automated match to d3dxua_
complexed with act, ni, zn
- Domain(s) for 5fp4:
Domain d5fp4a_: 5fp4 A: [314473]
automated match to d3dxua_
complexed with fe2, gol, so4, yc8, zn
- Domain(s) for 5fp7:
Domain d5fp7a_: 5fp7 A: [324898]
automated match to d3dxua_
complexed with fe2, gol, so4, yc8, zn
- Domain(s) for 5fp8:
Domain d5fp8a_: 5fp8 A: [314476]
automated match to d3dxua_
complexed with auy, co, so4, zn
- Domain(s) for 5fp9:
Domain d5fp9a_: 5fp9 A: [314492]
automated match to d3dxua_
complexed with 4sv, co, gol, so4, zn
- Domain(s) for 5fpa:
Domain d5fpaa_: 5fpa A: [314502]
automated match to d3dxua_
complexed with co, n5j, so4, zn
- Domain(s) for 5fpb:
Domain d5fpba_: 5fpb A: [314499]
automated match to d3dxua_
complexed with co, ha6, so4, zn
- Domain(s) for 6ete:
Domain d6etea_: 6ete A: [365054]
automated match to d3dxua_
complexed with bwk, edo, ni, so4, zn
- Domain(s) for 6etg:
Domain d6etga_: 6etg A: [365093]
automated match to d3dxua_
complexed with bwt, cl, edo, na, ni, so4, zn
- Domain(s) for 6ets:
Domain d6etsa_: 6ets A: [365037]
automated match to d3dxua_
complexed with cl, edo, i1l, na, ni, so4, zn
- Domain(s) for 6ett:
Domain d6etta_: 6ett A: [365048]
automated match to d3dxua_
complexed with bxh, cl, edo, na, ni, so4, zn
- Domain(s) for 6etu:
Domain d6etua_: 6etu A: [365038]
automated match to d3dxua_
complexed with bwz, cl, edo, na, ni, so4, zn
- Domain(s) for 6etv:
Domain d6etva_: 6etv A: [365261]
automated match to d3dxua_
complexed with bxe, cl, edo, epe, gol, na, ni, so4, zn
- Domain(s) for 6etw:
Domain d6etwa_: 6etw A: [365053]
automated match to d3dxua_
complexed with bx5, cl, edo, gol, ni, so4, zn
- Domain(s) for 6f5t:
Domain d6f5ta_: 6f5t A: [361091]
automated match to d3dxua_
complexed with cqk, edo, epe, ni, so4, zn
- Domain(s) for 6h0w:
Domain d6h0wa_: 6h0w A: [379431]
automated match to d3dxua_
complexed with cl, edo, epe, fhw, i1l, na, ni, so4, zn
- Domain(s) for 6h0x:
Domain d6h0xa_: 6h0x A: [379462]
automated match to d3dxua_
complexed with cl, edo, fjb, ni, zn
- Domain(s) for 6h0y:
Domain d6h0ya_: 6h0y A: [379433]
automated match to d3dxua_
complexed with edo, fhz, na, ni, so4, zn
- Domain(s) for 6h0z:
Domain d6h0za_: 6h0z A: [379430]
automated match to d3dxua_
complexed with cl, edo, fhq, na, ni, so4, zn
- Domain(s) for 6h10:
Domain d6h10a_: 6h10 A: [379434]
automated match to d3dxua_
complexed with cl, edo, epe, fj8, na, ni, so4, zn
- Domain(s) for 6h11:
Domain d6h11a_: 6h11 A: [379429]
automated match to d3dxua_
complexed with cl, edo, fht, ni, zn
More info for Species Human (Homo sapiens) [TaxId:9606] from b.82.2.14 JMJD2D core
Timeline for Species Human (Homo sapiens) [TaxId:9606] from b.82.2.14 JMJD2D core:
- Species Human (Homo sapiens) [TaxId:9606] from b.82.2.14 JMJD2D core first appeared in SCOPe 2.04
- Species Human (Homo sapiens) [TaxId:9606] from b.82.2.14 JMJD2D core appears in SCOPe 2.06
- Species Human (Homo sapiens) [TaxId:9606] from b.82.2.14 JMJD2D core appears in the current release, SCOPe 2.08