Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2403751Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
    one turn of helix is made by two pairs of antiparallel strands linked with short turns
    has appearance of a sandwich of distinct architecture and jelly-roll topology
  4. 2404605Superfamily b.82.2: Clavaminate synthase-like [51197] (16 families) (S)
    Iron and ketoglutarate-dependent enzymes; elaborated version of this common fold
  5. 2404954Family b.82.2.14: Histone demethylase core [254153] (4 proteins)
    Jumonji domain; Pfam PF02375 (JmjN) and Pfam PF02373 (JmjC); relationship to FIH1 (b.82.2.6) described in PubMed 16983801
  6. 2405069Protein JMJD2D core [254343] (1 species)
  7. 2405070Species Human (Homo sapiens) [TaxId:9606] [254776] (16 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 3dxu:
  2. Domain(s) for 4hoo:
    1. 2405078Domain d4hooa_: 4hoo A: [252476]
      automated match to d3dxua_
      complexed with act, ni, zn
    2. 2405079Domain d4hoob_: 4hoo B: [252477]
      automated match to d3dxua_
      complexed with act, ni, zn
  3. Domain(s) for 5fp4:
  4. Domain(s) for 5fp7:
  5. Domain(s) for 5fp8:
  6. Domain(s) for 5fp9:
  7. Domain(s) for 5fpa:
  8. Domain(s) for 5fpb:
  9. Domain(s) for 6ete:
  10. Domain(s) for 6etg:
  11. Domain(s) for 6ets:
  12. Domain(s) for 6ett:
  13. Domain(s) for 6etu:
  14. Domain(s) for 6etv:
    • 3065199Domain d6etva_: 6etv A: [365261]
      automated match to d3dxua_
      complexed with bxe, cl, edo, epe, gol, na, ni, so4, zn
  15. Domain(s) for 6etw:
  16. Domain(s) for 6f5t:

More info for Species Human (Homo sapiens) [TaxId:9606] from b.82.2.14 JMJD2D core

Timeline for Species Human (Homo sapiens) [TaxId:9606] from b.82.2.14 JMJD2D core: