SCOPe 2.08: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.08
Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
Fold d.74: DCoH-like [55247] (5 superfamilies)
beta(2)-alpha-beta(2)-alpha; 2 layers, alpha/beta
Superfamily d.74.3: RBP11-like subunits of RNA polymerase [55257] (3 families)
form homo and heterodimers
Family d.74.3.0: automated matches [254324] (1 protein)
not a true family
Protein automated matches [254742] (3 species)
not a true protein

Species:

Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [256218] (2 PDB entries)

Domains for 4c2m:

Domain d4c2mk_: 4c2m K: [240045]
Other proteins in same PDB: d4c2m1_, d4c2m2_, d4c2m3_, d4c2ma_, d4c2mb_, d4c2mc1, d4c2mc2, d4c2me1, d4c2me2, d4c2mf_, d4c2mg1, d4c2mh_, d4c2mi1, d4c2mi2, d4c2mj_, d4c2ml_, d4c2mm_, d4c2mn_, d4c2mp_, d4c2mq_, d4c2mr1, d4c2mr2, d4c2mt1, d4c2mt2, d4c2mu_, d4c2mv1, d4c2mw_, d4c2mx1, d4c2mx2, d4c2my_
automated match to d1twfk_
complexed with so4, zn

Domain d4c2mz_: 4c2m Z: [240046]
Other proteins in same PDB: d4c2m1_, d4c2m2_, d4c2m3_, d4c2ma_, d4c2mb_, d4c2mc1, d4c2mc2, d4c2me1, d4c2me2, d4c2mf_, d4c2mg1, d4c2mh_, d4c2mi1, d4c2mi2, d4c2mj_, d4c2ml_, d4c2mm_, d4c2mn_, d4c2mp_, d4c2mq_, d4c2mr1, d4c2mr2, d4c2mt1, d4c2mt2, d4c2mu_, d4c2mv1, d4c2mw_, d4c2mx1, d4c2mx2, d4c2my_
automated match to d1twfk_
complexed with so4, zn

Domain for 4c3i:

Domain d4c3ik_: 4c3i K: [251337]
Other proteins in same PDB: d4c3ia_, d4c3ib_, d4c3ie1, d4c3ie2, d4c3if_, d4c3ig1, d4c3ih_, d4c3ii1, d4c3ii2, d4c3ij_, d4c3il_, d4c3im_, d4c3in_
automated match to d1twfk_
complexed with mg, mpd, so4, zn

Human (Homo sapiens) [TaxId:9606] [398916] (1 PDB entry)
- Domain for 7d59:
  - Domain d7d59k_: 7d59 K: [398917]
    Other proteins in same PDB: d7d59f_, d7d59h_, d7d59j_, d7d59l_
    automated match to d4c3ik_
    complexed with sf4, zn
Sus scrofa [TaxId:9825] [404454] (2 PDB entries)
1. Domain for 7b7u:
  - Domain d7b7uk_: 7b7u K: [404455]
    Other proteins in same PDB: d7b7uf_, d7b7uh_, d7b7ui1, d7b7ui2, d7b7uj_, d7b7ul_
    automated match to d1twfk_
    protein/RNA complex; complexed with zn
2. Domain for 7f4g:
  - Domain d7f4gk_: 7f4g K: [418155]
    Other proteins in same PDB: d7f4gd_, d7f4gg1, d7f4gg2, d7f4gh_, d7f4gj_, d7f4gl_
    automated match to d7b7uk_
    complexed with zn

More info for Protein automated matches from d.74.3.0: automated matches

Timeline for Protein automated matches from d.74.3.0: automated matches:

Protein automated matches from d.74.3.0: automated matches first appeared in SCOPe 2.04
Protein automated matches from d.74.3.0: automated matches appears in SCOPe 2.07