SCOPe 2.08: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.08
Class f: Membrane and cell surface proteins and peptides [56835] (69 folds)
Fold f.1: Toxins' membrane translocation domains [56836] (5 superfamilies)
multi-helical domains of various folds which is thought to unfold in the membrane
Superfamily f.1.2: Diphtheria toxin, middle domain [56845] (2 families)
automatically mapped to Pfam PF02764
Family f.1.2.0: automated matches [254320] (1 protein)
not a true family
Protein automated matches [254734] (1 species)
not a true protein

Species:

Corynebacterium diphtheriae [TaxId:1717] [256177] (7 PDB entries)
1. Domain for 4ae0:
  - Domain d4ae0a2: 4ae0 A:201-380 [251009]
    Other proteins in same PDB: d4ae0a1, d4ae0a3
    automated match to d1ddta3
    mutant
2. Domains for 4ae1:
  1. Domain d4ae1a2: 4ae1 A:200-380 [251012]
    Other proteins in same PDB: d4ae1a1, d4ae1a3, d4ae1b1, d4ae1b3
    automated match to d1ddta3
    complexed with nca; mutant
  2. Domain d4ae1b2: 4ae1 B:201-380 [251015]
    Other proteins in same PDB: d4ae1a1, d4ae1a3, d4ae1b1, d4ae1b3
    automated match to d1ddta3
    complexed with nca; mutant
3. Domains for 5i82:
  1. Domain d5i82a2: 5i82 A:199-380 [315145]
    Other proteins in same PDB: d5i82a1, d5i82a3, d5i82b1, d5i82b3, d5i82c1, d5i82c3, d5i82d1, d5i82d3
    automated match to d1ddta3
    complexed with gol, so4; mutant
  2. Domain d5i82b2: 5i82 B:200-380 [314962]
    Other proteins in same PDB: d5i82a1, d5i82a3, d5i82b1, d5i82b3, d5i82c1, d5i82c3, d5i82d1, d5i82d3
    automated match to d1ddta3
    complexed with gol, so4; mutant
  3. Domain d5i82c2: 5i82 C:200-380 [314912]
    Other proteins in same PDB: d5i82a1, d5i82a3, d5i82b1, d5i82b3, d5i82c1, d5i82c3, d5i82d1, d5i82d3
    automated match to d1ddta3
    complexed with gol, so4; mutant
  4. Domain d5i82d2: 5i82 D:200-380 [315022]
    Other proteins in same PDB: d5i82a1, d5i82a3, d5i82b1, d5i82b3, d5i82c1, d5i82c3, d5i82d1, d5i82d3
    automated match to d1ddta3
    complexed with gol, so4; mutant
4. Domains for 7k7b:
  1. Domain d7k7ba2: 7k7b A:200-380 [394875]
    Other proteins in same PDB: d7k7ba1, d7k7ba3, d7k7ba4, d7k7bb1, d7k7bb3, d7k7bb4
    automated match to d1ddta3
  2. Domain d7k7bb2: 7k7b B:200-380 [394845]
    Other proteins in same PDB: d7k7ba1, d7k7ba3, d7k7ba4, d7k7bb1, d7k7bb3, d7k7bb4
    automated match to d1ddta3
5. Domains for 7k7c:
  1. Domain d7k7ca2: 7k7c A:200-380 [394816]
    Other proteins in same PDB: d7k7ca1, d7k7ca3, d7k7ca4, d7k7cb1, d7k7cb3, d7k7cb4
    automated match to d1ddta3
  2. Domain d7k7cb2: 7k7c B:200-380 [394741]
    Other proteins in same PDB: d7k7ca1, d7k7ca3, d7k7ca4, d7k7cb1, d7k7cb3, d7k7cb4
    automated match to d1ddta3
6. Domains for 7k7d:
  1. Domain d7k7da2: 7k7d A:200-380 [394775]
    Other proteins in same PDB: d7k7da1, d7k7da3, d7k7da4, d7k7db1, d7k7db3, d7k7db4
    automated match to d1ddta3
  2. Domain d7k7db2: 7k7d B:200-380 [394888]
    Other proteins in same PDB: d7k7da1, d7k7da3, d7k7da4, d7k7db1, d7k7db3, d7k7db4
    automated match to d1ddta3
7. Domains for 7k7e:
  1. Domain d7k7ea2: 7k7e A:200-380 [394949]
    Other proteins in same PDB: d7k7ea1, d7k7ea3, d7k7ea4, d7k7eb1, d7k7eb3, d7k7eb4
    automated match to d1ddta3
  2. Domain d7k7eb2: 7k7e B:200-380 [394852]
    Other proteins in same PDB: d7k7ea1, d7k7ea3, d7k7ea4, d7k7eb1, d7k7eb3, d7k7eb4
    automated match to d1ddta3

More info for Protein automated matches from f.1.2.0: automated matches

Timeline for Protein automated matches from f.1.2.0: automated matches:

Protein automated matches from f.1.2.0: automated matches first appeared in SCOPe 2.04
Protein automated matches from f.1.2.0: automated matches appears in SCOPe 2.07