Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2074640Fold b.98: Zn aminopeptidase N-terminal domain [63736] (1 superfamily)
    duplication: two beta-sandwiches of similar topologies are fused together in a single three beta-sheet domain
  4. 2074641Superfamily b.98.1: Zn aminopeptidase N-terminal domain [63737] (2 families) (S)
  5. 2074713Family b.98.1.0: automated matches [254305] (1 protein)
    not a true family
  6. 2074714Protein automated matches [254706] (5 species)
    not a true protein

Species:

  1. 2074715African clawed frog (Xenopus laevis) [TaxId:8355] [256266] (1 PDB entry)
  2. 2074718Human (Homo sapiens) [TaxId:9606] [255964] (16 PDB entries)
    1. Domains for 3mdj:
      1. 2074723Domain d3mdja1: 3mdj A:46-254 [247644]
        Other proteins in same PDB: d3mdja2, d3mdja3, d3mdja4, d3mdjb2, d3mdjb3, d3mdjb4, d3mdjc2, d3mdjc3, d3mdjc4
        automated match to d2yd0a1
        complexed with bes, nag, zn
      2. 2074724Domain d3mdjb1: 3mdj B:46-254 [247648]
        Other proteins in same PDB: d3mdja2, d3mdja3, d3mdja4, d3mdjb2, d3mdjb3, d3mdjb4, d3mdjc2, d3mdjc3, d3mdjc4
        automated match to d2yd0a1
        complexed with bes, nag, zn
      3. 2074725Domain d3mdjc1: 3mdj C:46-254 [247652]
        Other proteins in same PDB: d3mdja2, d3mdja3, d3mdja4, d3mdjb2, d3mdjb3, d3mdjb4, d3mdjc2, d3mdjc3, d3mdjc4
        automated match to d2yd0a1
        complexed with bes, nag, zn
    2. Domains for 3qnf:
      1. 2074726Domain d3qnfa1: 3qnf A:46-254 [248931]
        Other proteins in same PDB: d3qnfa2, d3qnfa3, d3qnfb2, d3qnfb3, d3qnfb4, d3qnfc2, d3qnfc3, d3qnfc4
        automated match to d2yd0a1
        complexed with nag, zn
      2. 2074727Domain d3qnfb1: 3qnf B:46-254 [248934]
        Other proteins in same PDB: d3qnfa2, d3qnfa3, d3qnfb2, d3qnfb3, d3qnfb4, d3qnfc2, d3qnfc3, d3qnfc4
        automated match to d2yd0a1
        complexed with nag, zn
      3. 2074728Domain d3qnfc1: 3qnf C:47-254 [248938]
        Other proteins in same PDB: d3qnfa2, d3qnfa3, d3qnfb2, d3qnfb3, d3qnfb4, d3qnfc2, d3qnfc3, d3qnfc4
        automated match to d2yd0a1
        complexed with nag, zn
    3. Domains for 3se6:
      1. 2074729Domain d3se6a1: 3se6 A:54-271 [249385]
        Other proteins in same PDB: d3se6a2, d3se6a3, d3se6a4, d3se6a5, d3se6b2, d3se6b3, d3se6b4, d3se6b5
        automated match to d2yd0a1
        complexed with lys, mes, nag, zn
      2. 2074730Domain d3se6b1: 3se6 B:55-271 [249389]
        Other proteins in same PDB: d3se6a2, d3se6a3, d3se6a4, d3se6a5, d3se6b2, d3se6b3, d3se6b4, d3se6b5
        automated match to d2yd0a1
        complexed with lys, mes, nag, zn
    4. Domain for 4fyq:
    5. Domain for 4fyr:
    6. Domain for 4fyt:
    7. Domains for 4jbs:
      1. 2074733Domain d4jbsa1: 4jbs A:54-271 [252872]
        Other proteins in same PDB: d4jbsa2, d4jbsa3, d4jbsa4, d4jbsa5, d4jbsb2, d4jbsb3, d4jbsb4, d4jbsb5
        automated match to d2yd0a1
        complexed with imd, nag, p52, zn
      2. 2074734Domain d4jbsb1: 4jbs B:55-271 [252876]
        Other proteins in same PDB: d4jbsa2, d4jbsa3, d4jbsa4, d4jbsa5, d4jbsb2, d4jbsb3, d4jbsb4, d4jbsb5
        automated match to d2yd0a1
        complexed with imd, nag, p52, zn
    8. Domains for 4p8q:
      1. 2074735Domain d4p8qa1: 4p8q A:159-366 [261381]
        Other proteins in same PDB: d4p8qa2, d4p8qa3, d4p8qa4, d4p8qb2, d4p8qb3, d4p8qb4
        automated match to d3se6a1
        complexed with nag, unl, zn
      2. 2074736Domain d4p8qb1: 4p8q B:160-366 [263456]
        Other proteins in same PDB: d4p8qa2, d4p8qa3, d4p8qa4, d4p8qb2, d4p8qb3, d4p8qb4
        automated match to d4p8qa1
        complexed with nag, unl, zn
    9. Domains for 4pj6:
      1. 2074731Domain d4pj6a1: 4pj6 A:159-366 [267174]
        Other proteins in same PDB: d4pj6a2, d4pj6a3, d4pj6a4, d4pj6b2, d4pj6b3, d4pj6b4
        automated match to d4p8qa1
        complexed with lys, nag, zn
      2. 2074732Domain d4pj6b1: 4pj6 B:160-366 [267178]
        Other proteins in same PDB: d4pj6a2, d4pj6a3, d4pj6a4, d4pj6b2, d4pj6b3, d4pj6b4
        automated match to d4p8qa1
        complexed with lys, nag, zn
    10. Domain for 5aen:
    11. Domains for 5cu5:
      1. 2074737Domain d5cu5a1: 5cu5 A:54-271 [277106]
        Other proteins in same PDB: d5cu5a2, d5cu5a3, d5cu5a4, d5cu5a5, d5cu5b2, d5cu5b3, d5cu5b4, d5cu5b5
        automated match to d3se6a1
        complexed with man, nag
      2. 2074738Domain d5cu5b1: 5cu5 B:55-271 [277110]
        Other proteins in same PDB: d5cu5a2, d5cu5a3, d5cu5a4, d5cu5a5, d5cu5b2, d5cu5b3, d5cu5b4, d5cu5b5
        automated match to d3se6a1
        complexed with man, nag
    12. Domain for 5fwq:
    13. Domains for 5j6s:
      1. 2287718Domain d5j6sb1: 5j6s B:54-271 [331019]
        Other proteins in same PDB: d5j6sa2, d5j6sa3, d5j6sa4, d5j6sa5, d5j6sb2, d5j6sb3, d5j6sb4, d5j6sb5
        automated match to d3se6a1
        complexed with 6ga, bma, man, nag, zn
      2. 2287730Domain d5j6sa1: 5j6s A:53-271 [331031]
        Other proteins in same PDB: d5j6sa2, d5j6sa3, d5j6sa4, d5j6sa5, d5j6sb2, d5j6sb3, d5j6sb4, d5j6sb5
        automated match to d3se6a1
        complexed with 6ga, bma, man, nag, zn
    14. Domains for 5k1v:
      1. 2289057Domain d5k1vb1: 5k1v B:54-271 [332358]
        Other proteins in same PDB: d5k1va2, d5k1va3, d5k1va4, d5k1va5, d5k1vb2, d5k1vb3
        automated match to d3se6a1
        complexed with 6px, man, nag, zn
      2. 2289086Domain d5k1va1: 5k1v A:54-271 [332387]
        Other proteins in same PDB: d5k1va2, d5k1va3, d5k1va4, d5k1va5, d5k1vb2, d5k1vb3
        automated match to d3se6a1
        complexed with 6px, man, nag, zn
    15. Domains for 5lhd:
      1. 2289284Domain d5lhdc1: 5lhd C:63-287 [332585]
        Other proteins in same PDB: d5lhda2, d5lhda3, d5lhda4, d5lhdb2, d5lhdb3, d5lhdb4, d5lhdc2, d5lhdc3, d5lhdc4, d5lhdd2, d5lhdd3, d5lhdd4
        automated match to d4fyqa1
        complexed with bma, edo, nag, zn
      2. 2289310Domain d5lhdd1: 5lhd D:64-287 [332611]
        Other proteins in same PDB: d5lhda2, d5lhda3, d5lhda4, d5lhdb2, d5lhdb3, d5lhdb4, d5lhdc2, d5lhdc3, d5lhdc4, d5lhdd2, d5lhdd3, d5lhdd4
        automated match to d4fyqa1
        complexed with bma, edo, nag, zn
      3. 2289369Domain d5lhdb1: 5lhd B:64-287 [332670]
        Other proteins in same PDB: d5lhda2, d5lhda3, d5lhda4, d5lhdb2, d5lhdb3, d5lhdb4, d5lhdc2, d5lhdc3, d5lhdc4, d5lhdd2, d5lhdd3, d5lhdd4
        automated match to d4fyqa1
        complexed with bma, edo, nag, zn
      4. 2289383Domain d5lhda1: 5lhd A:63-287 [332684]
        Other proteins in same PDB: d5lhda2, d5lhda3, d5lhda4, d5lhdb2, d5lhdb3, d5lhdb4, d5lhdc2, d5lhdc3, d5lhdc4, d5lhdd2, d5lhdd3, d5lhdd4
        automated match to d4fyqa1
        complexed with bma, edo, nag, zn
    16. Domains for 5mj6:
      1. 2289401Domain d5mj6a1: 5mj6 A:157-366 [332702]
        Other proteins in same PDB: d5mj6a2, d5mj6a3, d5mj6a4, d5mj6a5, d5mj6b2, d5mj6b3, d5mj6b4, d5mj6b5
        automated match to d4pj6a1
        complexed with 7o2, bma, br, man, nag, zn
      2. 2289429Domain d5mj6b1: 5mj6 B:160-366 [332730]
        Other proteins in same PDB: d5mj6a2, d5mj6a3, d5mj6a4, d5mj6a5, d5mj6b2, d5mj6b3, d5mj6b4, d5mj6b5
        automated match to d4pj6a1
        complexed with 7o2, bma, br, man, nag, zn
  3. 2074739Neisseria meningitidis [TaxId:122586] [259498] (1 PDB entry)
  4. 2074741Pig (Sus scrofa) [TaxId:9823] [311377] (11 PDB entries)
    1. Domain for 4fke:
    2. Domain for 4fkh:
    3. Domain for 4fkk:
    4. Domain for 4h5h:
    5. Domain for 4hol:
    6. Domain for 4hom:
    7. Domain for 4naq:
    8. Domain for 4nz8:
    9. Domain for 4ou3:
    10. Domains for 5lds:
      1. 2289272Domain d5ldsd1: 5lds D:63-282 [332573]
        Other proteins in same PDB: d5ldsa2, d5ldsa3, d5ldsa4, d5ldsb2, d5ldsb3, d5ldsb4, d5ldsc2, d5ldsc3, d5ldsc4, d5ldsd2, d5ldsd3, d5ldsd4
        automated match to d4fkha1
        complexed with act, bma, nag, zn
      2. 2289278Domain d5ldsc1: 5lds C:62-282 [332579]
        Other proteins in same PDB: d5ldsa2, d5ldsa3, d5ldsa4, d5ldsb2, d5ldsb3, d5ldsb4, d5ldsc2, d5ldsc3, d5ldsc4, d5ldsd2, d5ldsd3, d5ldsd4
        automated match to d4fkha1
        complexed with act, bma, nag, zn
      3. 2289341Domain d5ldsa1: 5lds A:61-282 [332642]
        Other proteins in same PDB: d5ldsa2, d5ldsa3, d5ldsa4, d5ldsb2, d5ldsb3, d5ldsb4, d5ldsc2, d5ldsc3, d5ldsc4, d5ldsd2, d5ldsd3, d5ldsd4
        automated match to d4fkha1
        complexed with act, bma, nag, zn
      4. 2289572Domain d5ldsb1: 5lds B:63-282 [332873]
        Other proteins in same PDB: d5ldsa2, d5ldsa3, d5ldsa4, d5ldsb2, d5ldsb3, d5ldsb4, d5ldsc2, d5ldsc3, d5ldsc4, d5ldsd2, d5ldsd3, d5ldsd4
        automated match to d4fkha1
        complexed with act, bma, nag, zn
    11. Domains for 5lg6:
      1. 2289615Domain d5lg6a1: 5lg6 A:59-282 [332916]
        Other proteins in same PDB: d5lg6a2, d5lg6a3, d5lg6a4, d5lg6b2, d5lg6b3, d5lg6b4
        automated match to d4fkha1
        complexed with nag, zn
      2. 2289836Domain d5lg6b1: 5lg6 B:61-282 [333137]
        Other proteins in same PDB: d5lg6a2, d5lg6a3, d5lg6a4, d5lg6b2, d5lg6b3, d5lg6b4
        automated match to d4fkha1
        complexed with nag, zn
  5. 2074751Thermoplasma acidophilum [TaxId:273075] [256032] (1 PDB entry)

More info for Protein automated matches from b.98.1.0: automated matches

Timeline for Protein automated matches from b.98.1.0: automated matches: