Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2581248Class g: Small proteins [56992] (98 folds)
  3. 2587435Fold g.41: Rubredoxin-like [57769] (17 superfamilies)
    metal(zinc or iron)-bound fold; sequence contains two CX(n)C motifs, in most cases n = 2
  4. 2587508Superfamily g.41.3: Zinc beta-ribbon [57783] (5 families) (S)
  5. 2587509Family g.41.3.1: Transcriptional factor domain [57784] (6 proteins)
  6. 2587588Protein automated matches [254700] (2 species)
    not a true protein

Species:

  1. 2587589Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [255950] (4 PDB entries)
    1. Domains for 3m3y:
      1. 2587590Domain d3m3yi1: 3m3y I:2-49 [247594]
        Other proteins in same PDB: d3m3ya_, d3m3yb_, d3m3ye1, d3m3ye2, d3m3yf_, d3m3yh_, d3m3yj_, d3m3yk_, d3m3yl_
        automated match to d1twfi1
        protein/DNA complex; protein/RNA complex; complexed with c7p, mg, zn
      2. 2587591Domain d3m3yi2: 3m3y I:50-120 [247595]
        Other proteins in same PDB: d3m3ya_, d3m3yb_, d3m3ye1, d3m3ye2, d3m3yf_, d3m3yh_, d3m3yj_, d3m3yk_, d3m3yl_
        automated match to d1i50i2
        protein/DNA complex; protein/RNA complex; complexed with c7p, mg, zn
    2. Domains for 3s1m:
      1. 2587596Domain d3s1mi1: 3s1m I:2-49 [249269]
        Other proteins in same PDB: d3s1ma_, d3s1mb_, d3s1me1, d3s1me2, d3s1mf_, d3s1mh_, d3s1mj_, d3s1mk_, d3s1ml_
        automated match to d1twfi1
        protein/DNA complex; protein/RNA complex; complexed with mg, zn
      2. 2587597Domain d3s1mi2: 3s1m I:50-120 [249270]
        Other proteins in same PDB: d3s1ma_, d3s1mb_, d3s1me1, d3s1me2, d3s1mf_, d3s1mh_, d3s1mj_, d3s1mk_, d3s1ml_
        automated match to d1i50i2
        protein/DNA complex; protein/RNA complex; complexed with mg, zn
    3. Domains for 3s1n:
      1. 2587594Domain d3s1ni1: 3s1n I:2-49 [249280]
        Other proteins in same PDB: d3s1na_, d3s1nb_, d3s1ne1, d3s1ne2, d3s1nf_, d3s1nh_, d3s1nj_, d3s1nk_, d3s1nl_
        automated match to d1twfi1
        protein/DNA complex; protein/RNA complex; complexed with mg, zn
      2. 2587595Domain d3s1ni2: 3s1n I:50-120 [249281]
        Other proteins in same PDB: d3s1na_, d3s1nb_, d3s1ne1, d3s1ne2, d3s1nf_, d3s1nh_, d3s1nj_, d3s1nk_, d3s1nl_
        automated match to d1i50i2
        protein/DNA complex; protein/RNA complex; complexed with mg, zn
    4. Domains for 4c3i:
      1. 2587592Domain d4c3ii1: 4c3i I:2-64 [343938]
        Other proteins in same PDB: d4c3ia_, d4c3ib_, d4c3ie1, d4c3ie2, d4c3if_, d4c3ig1, d4c3ih_, d4c3ij_, d4c3ik_, d4c3il_, d4c3im_, d4c3in_
        automated match to d4c3hi1
        complexed with mg, mpd, so4, zn
      2. 2587593Domain d4c3ii2: 4c3i I:65-125 [343939]
        Other proteins in same PDB: d4c3ia_, d4c3ib_, d4c3ie1, d4c3ie2, d4c3if_, d4c3ig1, d4c3ih_, d4c3ij_, d4c3ik_, d4c3il_, d4c3im_, d4c3in_
        automated match to d4c3hi2
        complexed with mg, mpd, so4, zn
  2. 2587598Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [256069] (1 PDB entry)

More info for Protein automated matches from g.41.3.1: Transcriptional factor domain

Timeline for Protein automated matches from g.41.3.1: Transcriptional factor domain: