Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1886641Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
  3. 1944794Fold d.218: Nucleotidyltransferase [81302] (1 superfamily)
    core: alpha-beta-turn-beta-X-beta-(alpha); mixed beta-sheet, order of core strands: 123
  4. 1944795Superfamily d.218.1: Nucleotidyltransferase [81301] (16 families) (S)
  5. 1945170Family d.218.1.8: RelA/SpoT domain [102945] (3 proteins)
    Pfam PF04607; ppGpp-synthetase
  6. 1945179Protein automated matches [254696] (3 species)
    not a true protein

Species:

  1. 1945180Bacillus subtilis [TaxId:1415167] [278587] (3 PDB entries)
    1. Domains for 5ded:
      1. 1945205Domain d5deda_: 5ded A: [278603]
        automated match to d2be3a1
        complexed with 0o2, mg
      2. 1945206Domain d5dedb_: 5ded B: [278605]
        automated match to d2be3a1
        complexed with 0o2, mg
      3. 1945207Domain d5dedc_: 5ded C: [278602]
        automated match to d2be3a1
        complexed with 0o2, mg
      4. 1945208Domain d5dedd_: 5ded D: [278606]
        automated match to d2be3a1
        complexed with 0o2, mg
      5. 1945209Domain d5dede_: 5ded E: [278604]
        automated match to d2be3a1
        complexed with 0o2, mg
      6. 1945210Domain d5dedf_: 5ded F: [278601]
        automated match to d2be3a1
        complexed with 0o2, mg
      7. 1945211Domain d5dedg_: 5ded G: [278600]
        automated match to d2be3a1
        complexed with 0o2, mg
      8. 1945212Domain d5dedh_: 5ded H: [278607]
        automated match to d2be3a1
        complexed with 0o2, mg
    2. Domains for 5dee:
      1. 1945181Domain d5deeo_: 5dee O: [278592]
        automated match to d2be3a1
        complexed with apc
      2. 1945182Domain d5deep_: 5dee P: [278589]
        automated match to d2be3a1
        complexed with apc
      3. 1945183Domain d5deeq_: 5dee Q: [278588]
        automated match to d2be3a1
        complexed with apc
      4. 1945184Domain d5deer_: 5dee R: [278590]
        automated match to d2be3a1
        complexed with apc
      5. 1945185Domain d5dees_: 5dee S: [278591]
        automated match to d2be3a1
        complexed with apc
      6. 1945186Domain d5deet_: 5dee T: [278596]
        automated match to d2be3a1
        complexed with apc
      7. 1945187Domain d5deeu_: 5dee U: [278598]
        automated match to d2be3a1
        complexed with apc
      8. 1945188Domain d5deev_: 5dee V: [278593]
        automated match to d2be3a1
        complexed with apc
      9. 1945189Domain d5deew_: 5dee W: [278597]
        automated match to d2be3a1
        complexed with apc
      10. 1945190Domain d5deex_: 5dee X: [278595]
        automated match to d2be3a1
        complexed with apc
      11. 1945191Domain d5deey_: 5dee Y: [278599]
        automated match to d2be3a1
        complexed with apc
      12. 1945192Domain d5deez_: 5dee Z: [278594]
        automated match to d2be3a1
        complexed with apc
    3. Domains for 5f2v:
      1. 1945193Domain d5f2vo_: 5f2v O: [279912]
        automated match to d2be3b_
        complexed with apc, mg
      2. 1945194Domain d5f2vp_: 5f2v P: [279910]
        automated match to d2be3b_
        complexed with apc, mg
      3. 1945195Domain d5f2vq_: 5f2v Q: [279909]
        automated match to d2be3b_
        complexed with apc, mg
      4. 1945196Domain d5f2vr_: 5f2v R: [279916]
        automated match to d2be3b_
        complexed with apc, mg
      5. 1945197Domain d5f2vs_: 5f2v S: [279917]
        automated match to d2be3b_
        complexed with apc, mg
      6. 1945198Domain d5f2vt_: 5f2v T: [279918]
        automated match to d2be3b_
        complexed with apc, mg
      7. 1945199Domain d5f2vu_: 5f2v U: [279919]
        automated match to d2be3b_
        complexed with apc, mg
      8. 1945200Domain d5f2vv_: 5f2v V: [279914]
        automated match to d2be3b_
        complexed with apc, mg
      9. 1945201Domain d5f2vw_: 5f2v W: [279915]
        automated match to d2be3b_
        complexed with apc, mg
      10. 1945202Domain d5f2vx_: 5f2v X: [279908]
        automated match to d2be3b_
        complexed with apc, mg
      11. 1945203Domain d5f2vy_: 5f2v Y: [279913]
        automated match to d2be3b_
        complexed with apc, mg
      12. 1945204Domain d5f2vz_: 5f2v Z: [279920]
        automated match to d2be3b_
        complexed with apc, mg
  2. 1945213Bacillus subtilis [TaxId:224308] [278608] (1 PDB entry)
  3. 1945218Streptococcus mutans [TaxId:210007] [255924] (1 PDB entry)

More info for Protein automated matches from d.218.1.8: RelA/SpoT domain

Timeline for Protein automated matches from d.218.1.8: RelA/SpoT domain: