Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2949054Fold d.58: Ferredoxin-like [54861] (62 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2955424Superfamily d.58.36: Nitrite/Sulfite reductase N-terminal domain-like [55124] (3 families) (S)
    duplication: contains two subdomains of this fold
  5. 2955515Family d.58.36.0: automated matches [254283] (1 protein)
    not a true family
  6. 2955516Protein automated matches [254662] (3 species)
    not a true protein

Species:

  1. 2955517Escherichia coli K-12 [TaxId:83333] [256262] (3 PDB entries)
    1. Domains for 4g38:
      1. 2955518Domain d4g38a1: 4g38 A:81-145 [252133]
        Other proteins in same PDB: d4g38a2, d4g38a4
        automated match to d1aopa1
        complexed with k, po4, sf4, srm; mutant
      2. 2955519Domain d4g38a3: 4g38 A:346-425 [252135]
        Other proteins in same PDB: d4g38a2, d4g38a4
        automated match to d1aopa2
        complexed with k, po4, sf4, srm; mutant
    2. Domains for 4g39:
      1. 2955522Domain d4g39a1: 4g39 A:80-145 [252137]
        Other proteins in same PDB: d4g39a2, d4g39a4
        automated match to d1aopa1
        complexed with k, po4, sf4, srm; mutant
      2. 2955523Domain d4g39a3: 4g39 A:346-425 [252139]
        Other proteins in same PDB: d4g39a2, d4g39a4
        automated match to d1aopa2
        complexed with k, po4, sf4, srm; mutant
    3. Domains for 4htr:
      1. 2955520Domain d4htra1: 4htr A:83-144 [252502]
        Other proteins in same PDB: d4htra2, d4htra4
        automated match to d1aopa1
        complexed with na, sf4, so3, srm
      2. 2955521Domain d4htra3: 4htr A:346-425 [252504]
        Other proteins in same PDB: d4htra2, d4htra4
        automated match to d1aopa2
        complexed with na, sf4, so3, srm
  2. 2955524Escherichia coli [TaxId:83333] [353425] (4 PDB entries)
    1. Domains for 6c3m:
      1. 2955525Domain d6c3ma1: 6c3m A:80-145 [353467]
        Other proteins in same PDB: d6c3ma2, d6c3ma4
        automated match to d1aopa1
        complexed with k, po4, sf4, srm
      2. 2955526Domain d6c3ma3: 6c3m A:346-425 [353469]
        Other proteins in same PDB: d6c3ma2, d6c3ma4
        automated match to d1aopa2
        complexed with k, po4, sf4, srm
    2. Domains for 6c3x:
      1. 2955527Domain d6c3xa1: 6c3x A:81-145 [353486]
        Other proteins in same PDB: d6c3xa2, d6c3xa4
        automated match to d1aopa1
        complexed with k, po4, sf4, srm
      2. 2955528Domain d6c3xa3: 6c3x A:346-425 [353488]
        Other proteins in same PDB: d6c3xa2, d6c3xa4
        automated match to d1aopa2
        complexed with k, po4, sf4, srm
    3. Domains for 6c3y:
      1. 2955529Domain d6c3ya1: 6c3y A:81-145 [353534]
        Other proteins in same PDB: d6c3ya2, d6c3ya4
        automated match to d1aopa1
        complexed with k, po4, sf4, srm
      2. 2955530Domain d6c3ya3: 6c3y A:346-425 [353536]
        Other proteins in same PDB: d6c3ya2, d6c3ya4
        automated match to d1aopa2
        complexed with k, po4, sf4, srm
    4. Domains for 6c3z:
      1. 2955531Domain d6c3za1: 6c3z A:82-147 [353429]
        Other proteins in same PDB: d6c3za2, d6c3za4
        automated match to d1aopa1
        complexed with k, po4, sf4, srm
      2. 2955532Domain d6c3za3: 6c3z A:346-425 [353432]
        Other proteins in same PDB: d6c3za2, d6c3za4
        automated match to d1aopa2
        complexed with k, po4, sf4, srm
  3. 2955533Tobacco (Nicotiana tabacum) [TaxId:4097] [255757] (16 PDB entries)
    1. Domains for 3b0g:
      1. 2955534Domain d3b0ga1: 3b0g A:18-174 [245323]
        Other proteins in same PDB: d3b0ga2, d3b0ga4
        automated match to d2akja2
        complexed with cl, k, sf4, srm
      2. 2955535Domain d3b0ga3: 3b0g A:346-429 [245325]
        Other proteins in same PDB: d3b0ga2, d3b0ga4
        automated match to d2akja1
        complexed with cl, k, sf4, srm
    2. Domains for 3b0h:
      1. 2955564Domain d3b0ha1: 3b0h A:20-174 [245327]
        Other proteins in same PDB: d3b0ha2, d3b0ha4, d3b0hb2, d3b0hb4
        automated match to d2akja2
        complexed with cl, k, sf4, srm
      2. 2955565Domain d3b0ha3: 3b0h A:346-430 [245329]
        Other proteins in same PDB: d3b0ha2, d3b0ha4, d3b0hb2, d3b0hb4
        automated match to d2akja1
        complexed with cl, k, sf4, srm
      3. 2955566Domain d3b0hb1: 3b0h B:21-174 [245331]
        Other proteins in same PDB: d3b0ha2, d3b0ha4, d3b0hb2, d3b0hb4
        automated match to d2akja2
        complexed with cl, k, sf4, srm
      4. 2955567Domain d3b0hb3: 3b0h B:346-430 [245333]
        Other proteins in same PDB: d3b0ha2, d3b0ha4, d3b0hb2, d3b0hb4
        automated match to d2akja1
        complexed with cl, k, sf4, srm
    3. Domains for 3b0j:
      1. 2955552Domain d3b0ja1: 3b0j A:18-174 [245335]
        Other proteins in same PDB: d3b0ja2, d3b0ja4
        automated match to d2akja2
        complexed with cl, k, sf4, srm; mutant
      2. 2955553Domain d3b0ja3: 3b0j A:346-429 [245337]
        Other proteins in same PDB: d3b0ja2, d3b0ja4
        automated match to d2akja1
        complexed with cl, k, sf4, srm; mutant
    4. Domains for 3b0l:
      1. 2955560Domain d3b0la1: 3b0l A:18-174 [245339]
        Other proteins in same PDB: d3b0la2, d3b0la4
        automated match to d2akja2
        complexed with cl, k, sf4, srm; mutant
      2. 2955561Domain d3b0la3: 3b0l A:346-429 [245341]
        Other proteins in same PDB: d3b0la2, d3b0la4
        automated match to d2akja1
        complexed with cl, k, sf4, srm; mutant
    5. Domains for 3b0m:
      1. 2955556Domain d3b0ma1: 3b0m A:18-174 [245343]
        Other proteins in same PDB: d3b0ma2, d3b0ma4
        automated match to d2akja2
        complexed with cl, k, sf4, srm; mutant
      2. 2955557Domain d3b0ma3: 3b0m A:346-429 [245345]
        Other proteins in same PDB: d3b0ma2, d3b0ma4
        automated match to d2akja1
        complexed with cl, k, sf4, srm; mutant
    6. Domains for 3b0n:
      1. 2955558Domain d3b0na1: 3b0n A:18-174 [245347]
        Other proteins in same PDB: d3b0na2, d3b0na4
        automated match to d2akja2
        complexed with cl, k, sf4, srm; mutant
      2. 2955559Domain d3b0na3: 3b0n A:346-429 [245349]
        Other proteins in same PDB: d3b0na2, d3b0na4
        automated match to d2akja1
        complexed with cl, k, sf4, srm; mutant
    7. Domains for 3vkp:
      1. 2955542Domain d3vkpa1: 3vkp A:18-174 [250576]
        Other proteins in same PDB: d3vkpa2, d3vkpa4
        automated match to d2akja2
        complexed with cl, k, no2, sf4, srm
      2. 2955543Domain d3vkpa3: 3vkp A:346-429 [250578]
        Other proteins in same PDB: d3vkpa2, d3vkpa4
        automated match to d2akja1
        complexed with cl, k, no2, sf4, srm
    8. Domains for 3vkq:
      1. 2955550Domain d3vkqa1: 3vkq A:18-174 [250580]
        Other proteins in same PDB: d3vkqa2, d3vkqa4
        automated match to d2akja2
        complexed with cl, k, no2, sf4, srm
      2. 2955551Domain d3vkqa3: 3vkq A:346-429 [250582]
        Other proteins in same PDB: d3vkqa2, d3vkqa4
        automated match to d2akja1
        complexed with cl, k, no2, sf4, srm
    9. Domains for 3vkr:
      1. 2955548Domain d3vkra1: 3vkr A:18-174 [250584]
        Other proteins in same PDB: d3vkra2, d3vkra4
        automated match to d2akja2
        complexed with cl, k, no2, sf4, srm
      2. 2955549Domain d3vkra3: 3vkr A:346-429 [250586]
        Other proteins in same PDB: d3vkra2, d3vkra4
        automated match to d2akja1
        complexed with cl, k, no2, sf4, srm
    10. Domains for 3vks:
      1. 2955540Domain d3vksa1: 3vks A:18-174 [250588]
        Other proteins in same PDB: d3vksa2, d3vksa4
        automated match to d2akja2
        complexed with cl, k, no, sf4, srm
      2. 2955541Domain d3vksa3: 3vks A:346-429 [250590]
        Other proteins in same PDB: d3vksa2, d3vksa4
        automated match to d2akja1
        complexed with cl, k, no, sf4, srm
    11. Domains for 3vkt:
      1. 2955536Domain d3vkta1: 3vkt A:18-174 [250592]
        Other proteins in same PDB: d3vkta2, d3vkta4
        automated match to d2akja2
        complexed with cl, hoa, k, sf4, srm
      2. 2955537Domain d3vkta3: 3vkt A:346-429 [250594]
        Other proteins in same PDB: d3vkta2, d3vkta4
        automated match to d2akja1
        complexed with cl, hoa, k, sf4, srm
    12. Domains for 3vlx:
      1. 2955538Domain d3vlxa1: 3vlx A:18-174 [250596]
        Other proteins in same PDB: d3vlxa2, d3vlxa4
        automated match to d2akja2
        complexed with cl, k, sf4, srm; mutant
      2. 2955539Domain d3vlxa3: 3vlx A:346-429 [250598]
        Other proteins in same PDB: d3vlxa2, d3vlxa4
        automated match to d2akja1
        complexed with cl, k, sf4, srm; mutant
    13. Domains for 3vly:
      1. 2955546Domain d3vlya1: 3vly A:18-174 [250600]
        Other proteins in same PDB: d3vlya2, d3vlya4
        automated match to d2akja2
        complexed with cl, k, sf4, so3, srm; mutant
      2. 2955547Domain d3vlya3: 3vly A:346-429 [250602]
        Other proteins in same PDB: d3vlya2, d3vlya4
        automated match to d2akja1
        complexed with cl, k, sf4, so3, srm; mutant
    14. Domains for 3vlz:
      1. 2955562Domain d3vlza1: 3vlz A:18-174 [250604]
        Other proteins in same PDB: d3vlza2, d3vlza4
        automated match to d2akja2
        complexed with cl, k, sf4, so3, srm; mutant
      2. 2955563Domain d3vlza3: 3vlz A:346-429 [250606]
        Other proteins in same PDB: d3vlza2, d3vlza4
        automated match to d2akja1
        complexed with cl, k, sf4, so3, srm; mutant
    15. Domains for 3vm0:
      1. 2955554Domain d3vm0a1: 3vm0 A:18-174 [250608]
        Other proteins in same PDB: d3vm0a2, d3vm0a4
        automated match to d2akja2
        complexed with cl, k, no2, sf4, srm; mutant
      2. 2955555Domain d3vm0a3: 3vm0 A:346-429 [250610]
        Other proteins in same PDB: d3vm0a2, d3vm0a4
        automated match to d2akja1
        complexed with cl, k, no2, sf4, srm; mutant
    16. Domains for 3vm1:
      1. 2955544Domain d3vm1a1: 3vm1 A:18-174 [250612]
        Other proteins in same PDB: d3vm1a2, d3vm1a4
        automated match to d2akja2
        complexed with bct, cl, k, sf4, srm; mutant
      2. 2955545Domain d3vm1a3: 3vm1 A:346-429 [250614]
        Other proteins in same PDB: d3vm1a2, d3vm1a4
        automated match to d2akja1
        complexed with bct, cl, k, sf4, srm; mutant

More info for Protein automated matches from d.58.36.0: automated matches

Timeline for Protein automated matches from d.58.36.0: automated matches: