Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1886641Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
  3. 1919500Fold d.96: T-fold [55619] (2 superfamilies)
    beta(2)-alpha(2)-beta(2); 2 layers: alpha/beta; antiparallel sheet 1234
    tunnel-shaped: its known members form wide oligomeric barrels different sizes
  4. 1919501Superfamily d.96.1: Tetrahydrobiopterin biosynthesis enzymes-like [55620] (5 families) (S)
    bind purine or pterin in topologically similar sites between subunits
  5. 1919751Family d.96.1.4: Urate oxidase (uricase) [55633] (2 proteins)
    automatically mapped to Pfam PF01014
  6. 1919964Protein automated matches [254656] (3 species)
    not a true protein

Species:

  1. 1919965Arthrobacter globiformis [TaxId:1665] [255720] (4 PDB entries)
    1. Domains for 2yzb:
      1. 1919982Domain d2yzba1: 2yzb A:11-141 [153838]
        automated match to d2yzca1
        complexed with urc
      2. 1919983Domain d2yzba2: 2yzb A:142-297 [153839]
        automated match to d2yzca2
        complexed with urc
      3. 1919984Domain d2yzbb1: 2yzb B:11-141 [153840]
        automated match to d2yzca1
        complexed with urc
      4. 1919985Domain d2yzbb2: 2yzb B:142-297 [153841]
        automated match to d2yzca2
        complexed with urc
      5. 1919986Domain d2yzbc1: 2yzb C:11-141 [153842]
        automated match to d2yzca1
        complexed with urc
      6. 1919987Domain d2yzbc2: 2yzb C:142-297 [153843]
        automated match to d2yzca2
        complexed with urc
      7. 1919988Domain d2yzbd1: 2yzb D:11-141 [153844]
        automated match to d2yzca1
        complexed with urc
      8. 1919989Domain d2yzbd2: 2yzb D:142-297 [153845]
        automated match to d2yzca2
        complexed with urc
      9. 1919990Domain d2yzbe1: 2yzb E:11-141 [153846]
        automated match to d2yzca1
        complexed with urc
      10. 1919991Domain d2yzbe2: 2yzb E:142-296 [153847]
        automated match to d2yzca2
        complexed with urc
      11. 1919992Domain d2yzbf1: 2yzb F:11-141 [153848]
        automated match to d2yzca1
        complexed with urc
      12. 1919993Domain d2yzbf2: 2yzb F:142-297 [153849]
        automated match to d2yzca2
        complexed with urc
      13. 1919994Domain d2yzbg1: 2yzb G:11-141 [153850]
        automated match to d2yzca1
        complexed with urc
      14. 1919995Domain d2yzbg2: 2yzb G:142-297 [153851]
        automated match to d2yzca2
        complexed with urc
      15. 1919996Domain d2yzbh1: 2yzb H:11-141 [153852]
        automated match to d2yzca1
        complexed with urc
      16. 1919997Domain d2yzbh2: 2yzb H:142-297 [153853]
        automated match to d2yzca2
        complexed with urc
    2. Domains for 2yzc:
      1. 1919966Domain d2yzca1: 2yzc A:11-141 [153854]
        automated match to d2yzca1
        complexed with 1al
      2. 1919967Domain d2yzca2: 2yzc A:142-297 [153855]
        automated match to d2yzca2
        complexed with 1al
      3. 1919968Domain d2yzcb1: 2yzc B:11-141 [153856]
        automated match to d2yzca1
        complexed with 1al
      4. 1919969Domain d2yzcb2: 2yzc B:142-297 [153857]
        automated match to d2yzca2
        complexed with 1al
      5. 1919970Domain d2yzcc1: 2yzc C:11-141 [153858]
        automated match to d2yzca1
        complexed with 1al
      6. 1919971Domain d2yzcc2: 2yzc C:142-297 [153859]
        automated match to d2yzca2
        complexed with 1al
      7. 1919972Domain d2yzcd1: 2yzc D:11-141 [153860]
        automated match to d2yzca1
        complexed with 1al
      8. 1919973Domain d2yzcd2: 2yzc D:142-297 [153861]
        automated match to d2yzca2
        complexed with 1al
      9. 1919974Domain d2yzce1: 2yzc E:11-141 [153862]
        automated match to d2yzce1
        complexed with 1al
      10. 1919975Domain d2yzce2: 2yzc E:142-297 [153863]
        automated match to d2yzce2
        complexed with 1al
      11. 1919976Domain d2yzcf1: 2yzc F:11-141 [153864]
        automated match to d2yzce1
        complexed with 1al
      12. 1919977Domain d2yzcf2: 2yzc F:142-297 [153865]
        automated match to d2yzce2
        complexed with 1al
      13. 1919978Domain d2yzcg1: 2yzc G:11-141 [153866]
        automated match to d2yzce1
        complexed with 1al
      14. 1919979Domain d2yzcg2: 2yzc G:142-297 [153867]
        automated match to d2yzce2
        complexed with 1al
      15. 1919980Domain d2yzch1: 2yzc H:11-141 [153868]
        automated match to d2yzce1
        complexed with 1al
      16. 1919981Domain d2yzch2: 2yzc H:142-297 [153869]
        automated match to d2yzce2
        complexed with 1al
    3. Domains for 2yzd:
      1. 1920014Domain d2yzda1: 2yzd A:11-141 [153870]
        automated match to d2yzea1
        complexed with aza
      2. 1920015Domain d2yzda2: 2yzd A:142-297 [153871]
        automated match to d2yzea2
        complexed with aza
      3. 1920016Domain d2yzdb1: 2yzd B:11-141 [153872]
        automated match to d2yzea1
        complexed with aza
      4. 1920017Domain d2yzdb2: 2yzd B:142-297 [153873]
        automated match to d2yzea2
        complexed with aza
      5. 1920018Domain d2yzdc1: 2yzd C:11-141 [153874]
        automated match to d2yzea1
        complexed with aza
      6. 1920019Domain d2yzdc2: 2yzd C:142-297 [153875]
        automated match to d2yzea2
        complexed with aza
      7. 1920020Domain d2yzdd1: 2yzd D:11-141 [153876]
        automated match to d2yzea1
        complexed with aza
      8. 1920021Domain d2yzdd2: 2yzd D:142-297 [153877]
        automated match to d2yzea2
        complexed with aza
      9. 1920022Domain d2yzde1: 2yzd E:11-141 [153878]
        automated match to d2yzea1
        complexed with aza
      10. 1920023Domain d2yzde2: 2yzd E:142-297 [153879]
        automated match to d2yzea2
        complexed with aza
      11. 1920024Domain d2yzdf1: 2yzd F:11-141 [153880]
        automated match to d2yzea1
        complexed with aza
      12. 1920025Domain d2yzdf2: 2yzd F:142-297 [153881]
        automated match to d2yzea2
        complexed with aza
      13. 1920026Domain d2yzdg1: 2yzd G:11-141 [153882]
        automated match to d2yzea1
        complexed with aza
      14. 1920027Domain d2yzdg2: 2yzd G:142-297 [153883]
        automated match to d2yzea2
        complexed with aza
      15. 1920028Domain d2yzdh1: 2yzd H:11-141 [153884]
        automated match to d2yzea1
        complexed with aza
      16. 1920029Domain d2yzdh2: 2yzd H:142-297 [153885]
        automated match to d2yzea2
        complexed with aza
    4. Domains for 2yze:
      1. 1919998Domain d2yzea1: 2yze A:11-141 [153886]
        automated match to d2yzea1
        complexed with nob
      2. 1919999Domain d2yzea2: 2yze A:142-297 [153887]
        automated match to d2yzea2
        complexed with nob
      3. 1920000Domain d2yzeb1: 2yze B:11-141 [153888]
        automated match to d2yzea1
        complexed with nob
      4. 1920001Domain d2yzeb2: 2yze B:142-297 [153889]
        automated match to d2yzea2
        complexed with nob
      5. 1920002Domain d2yzec1: 2yze C:11-141 [153890]
        automated match to d2yzec1
        complexed with nob
      6. 1920003Domain d2yzec2: 2yze C:142-297 [153891]
        automated match to d2yzec2
        complexed with nob
      7. 1920004Domain d2yzed1: 2yze D:11-141 [153892]
        automated match to d2yzec1
        complexed with nob
      8. 1920005Domain d2yzed2: 2yze D:142-297 [153893]
        automated match to d2yzec2
        complexed with nob
      9. 1920006Domain d2yzee1: 2yze E:11-141 [153894]
        automated match to d2yzea1
        complexed with nob
      10. 1920007Domain d2yzee2: 2yze E:142-297 [153895]
        automated match to d2yzea2
        complexed with nob
      11. 1920008Domain d2yzef1: 2yze F:11-141 [153896]
        automated match to d2yzef1
        complexed with nob
      12. 1920009Domain d2yzef2: 2yze F:142-297 [153897]
        automated match to d2yzef2
        complexed with nob
      13. 1920010Domain d2yzeg1: 2yze G:11-141 [153898]
        automated match to d2yzec1
        complexed with nob
      14. 1920011Domain d2yzeg2: 2yze G:142-297 [153899]
        automated match to d2yzec2
        complexed with nob
      15. 1920012Domain d2yzeh1: 2yze H:11-141 [153900]
        automated match to d2yzec1
        complexed with nob
      16. 1920013Domain d2yzeh2: 2yze H:142-297 [153901]
        automated match to d2yzec2
        complexed with nob
  2. 1920030Aspergillus flavus [TaxId:5059] [260668] (4 PDB entries)
    1. Domains for 4d12:
      1. 1920037Domain d4d12a1: 4d12 A:1-136 [260669]
        automated match to d4n9sa1
        complexed with mpd, urc
      2. 1920038Domain d4d12a2: 4d12 A:137-301 [260670]
        automated match to d4n9sa2
        complexed with mpd, urc
    2. Domains for 4d13:
      1. 1920031Domain d4d13a1: 4d13 A:1-136 [261772]
        automated match to d4n9sa1
        complexed with iup, mpd
      2. 1920032Domain d4d13a2: 4d13 A:137-296 [261774]
        automated match to d4n9sa2
        complexed with iup, mpd
    3. Domains for 4d17:
      1. 1920033Domain d4d17a1: 4d17 A:1-136 [261776]
        automated match to d4n9sa1
        complexed with iup, mpd, oxy, urc
      2. 1920034Domain d4d17a2: 4d17 A:137-296 [261777]
        automated match to d4n9sa2
        complexed with iup, mpd, oxy, urc
    4. Domains for 4d19:
      1. 1920035Domain d4d19a1: 4d19 A:1-136 [261773]
        automated match to d4n9sa1
        complexed with iup, mpd, oxy, urc
      2. 1920036Domain d4d19a2: 4d19 A:137-296 [261775]
        automated match to d4n9sa2
        complexed with iup, mpd, oxy, urc
  3. 1920039Bacillus tb-90 [TaxId:36824] [280497] (1 PDB entry)

More info for Protein automated matches from d.96.1.4: Urate oxidase (uricase)

Timeline for Protein automated matches from d.96.1.4: Urate oxidase (uricase):