Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1662613Fold d.96: T-fold [55619] (2 superfamilies)
    beta(2)-alpha(2)-beta(2); 2 layers: alpha/beta; antiparallel sheet 1234
    tunnel-shaped: its known members form wide oligomeric barrels different sizes
  4. 1662614Superfamily d.96.1: Tetrahydrobiopterin biosynthesis enzymes-like [55620] (5 families) (S)
    bind purine or pterin in topologically similar sites between subunits
  5. 1662861Family d.96.1.4: Urate oxidase (uricase) [55633] (2 proteins)
    automatically mapped to Pfam PF01014
  6. 1663066Protein automated matches [254656] (2 species)
    not a true protein

Species:

  1. 1663067Arthrobacter globiformis [TaxId:1665] [255720] (4 PDB entries)
    1. Domains for 2yzb:
      1. 1663084Domain d2yzba1: 2yzb A:11-141 [153838]
        automated match to d2yzca1
        complexed with urc
      2. 1663085Domain d2yzba2: 2yzb A:142-297 [153839]
        automated match to d2yzca2
        complexed with urc
      3. 1663086Domain d2yzbb1: 2yzb B:11-141 [153840]
        automated match to d2yzca1
        complexed with urc
      4. 1663087Domain d2yzbb2: 2yzb B:142-297 [153841]
        automated match to d2yzca2
        complexed with urc
      5. 1663088Domain d2yzbc1: 2yzb C:11-141 [153842]
        automated match to d2yzca1
        complexed with urc
      6. 1663089Domain d2yzbc2: 2yzb C:142-297 [153843]
        automated match to d2yzca2
        complexed with urc
      7. 1663090Domain d2yzbd1: 2yzb D:11-141 [153844]
        automated match to d2yzca1
        complexed with urc
      8. 1663091Domain d2yzbd2: 2yzb D:142-297 [153845]
        automated match to d2yzca2
        complexed with urc
      9. 1663092Domain d2yzbe1: 2yzb E:11-141 [153846]
        automated match to d2yzca1
        complexed with urc
      10. 1663093Domain d2yzbe2: 2yzb E:142-296 [153847]
        automated match to d2yzca2
        complexed with urc
      11. 1663094Domain d2yzbf1: 2yzb F:11-141 [153848]
        automated match to d2yzca1
        complexed with urc
      12. 1663095Domain d2yzbf2: 2yzb F:142-297 [153849]
        automated match to d2yzca2
        complexed with urc
      13. 1663096Domain d2yzbg1: 2yzb G:11-141 [153850]
        automated match to d2yzca1
        complexed with urc
      14. 1663097Domain d2yzbg2: 2yzb G:142-297 [153851]
        automated match to d2yzca2
        complexed with urc
      15. 1663098Domain d2yzbh1: 2yzb H:11-141 [153852]
        automated match to d2yzca1
        complexed with urc
      16. 1663099Domain d2yzbh2: 2yzb H:142-297 [153853]
        automated match to d2yzca2
        complexed with urc
    2. Domains for 2yzc:
      1. 1663068Domain d2yzca1: 2yzc A:11-141 [153854]
        automated match to d2yzca1
        complexed with 1al
      2. 1663069Domain d2yzca2: 2yzc A:142-297 [153855]
        automated match to d2yzca2
        complexed with 1al
      3. 1663070Domain d2yzcb1: 2yzc B:11-141 [153856]
        automated match to d2yzca1
        complexed with 1al
      4. 1663071Domain d2yzcb2: 2yzc B:142-297 [153857]
        automated match to d2yzca2
        complexed with 1al
      5. 1663072Domain d2yzcc1: 2yzc C:11-141 [153858]
        automated match to d2yzca1
        complexed with 1al
      6. 1663073Domain d2yzcc2: 2yzc C:142-297 [153859]
        automated match to d2yzca2
        complexed with 1al
      7. 1663074Domain d2yzcd1: 2yzc D:11-141 [153860]
        automated match to d2yzca1
        complexed with 1al
      8. 1663075Domain d2yzcd2: 2yzc D:142-297 [153861]
        automated match to d2yzca2
        complexed with 1al
      9. 1663076Domain d2yzce1: 2yzc E:11-141 [153862]
        automated match to d2yzce1
        complexed with 1al
      10. 1663077Domain d2yzce2: 2yzc E:142-297 [153863]
        automated match to d2yzce2
        complexed with 1al
      11. 1663078Domain d2yzcf1: 2yzc F:11-141 [153864]
        automated match to d2yzce1
        complexed with 1al
      12. 1663079Domain d2yzcf2: 2yzc F:142-297 [153865]
        automated match to d2yzce2
        complexed with 1al
      13. 1663080Domain d2yzcg1: 2yzc G:11-141 [153866]
        automated match to d2yzce1
        complexed with 1al
      14. 1663081Domain d2yzcg2: 2yzc G:142-297 [153867]
        automated match to d2yzce2
        complexed with 1al
      15. 1663082Domain d2yzch1: 2yzc H:11-141 [153868]
        automated match to d2yzce1
        complexed with 1al
      16. 1663083Domain d2yzch2: 2yzc H:142-297 [153869]
        automated match to d2yzce2
        complexed with 1al
    3. Domains for 2yzd:
      1. 1663116Domain d2yzda1: 2yzd A:11-141 [153870]
        automated match to d2yzea1
        complexed with aza
      2. 1663117Domain d2yzda2: 2yzd A:142-297 [153871]
        automated match to d2yzea2
        complexed with aza
      3. 1663118Domain d2yzdb1: 2yzd B:11-141 [153872]
        automated match to d2yzea1
        complexed with aza
      4. 1663119Domain d2yzdb2: 2yzd B:142-297 [153873]
        automated match to d2yzea2
        complexed with aza
      5. 1663120Domain d2yzdc1: 2yzd C:11-141 [153874]
        automated match to d2yzea1
        complexed with aza
      6. 1663121Domain d2yzdc2: 2yzd C:142-297 [153875]
        automated match to d2yzea2
        complexed with aza
      7. 1663122Domain d2yzdd1: 2yzd D:11-141 [153876]
        automated match to d2yzea1
        complexed with aza
      8. 1663123Domain d2yzdd2: 2yzd D:142-297 [153877]
        automated match to d2yzea2
        complexed with aza
      9. 1663124Domain d2yzde1: 2yzd E:11-141 [153878]
        automated match to d2yzea1
        complexed with aza
      10. 1663125Domain d2yzde2: 2yzd E:142-297 [153879]
        automated match to d2yzea2
        complexed with aza
      11. 1663126Domain d2yzdf1: 2yzd F:11-141 [153880]
        automated match to d2yzea1
        complexed with aza
      12. 1663127Domain d2yzdf2: 2yzd F:142-297 [153881]
        automated match to d2yzea2
        complexed with aza
      13. 1663128Domain d2yzdg1: 2yzd G:11-141 [153882]
        automated match to d2yzea1
        complexed with aza
      14. 1663129Domain d2yzdg2: 2yzd G:142-297 [153883]
        automated match to d2yzea2
        complexed with aza
      15. 1663130Domain d2yzdh1: 2yzd H:11-141 [153884]
        automated match to d2yzea1
        complexed with aza
      16. 1663131Domain d2yzdh2: 2yzd H:142-297 [153885]
        automated match to d2yzea2
        complexed with aza
    4. Domains for 2yze:
      1. 1663100Domain d2yzea1: 2yze A:11-141 [153886]
        automated match to d2yzea1
        complexed with nob
      2. 1663101Domain d2yzea2: 2yze A:142-297 [153887]
        automated match to d2yzea2
        complexed with nob
      3. 1663102Domain d2yzeb1: 2yze B:11-141 [153888]
        automated match to d2yzea1
        complexed with nob
      4. 1663103Domain d2yzeb2: 2yze B:142-297 [153889]
        automated match to d2yzea2
        complexed with nob
      5. 1663104Domain d2yzec1: 2yze C:11-141 [153890]
        automated match to d2yzec1
        complexed with nob
      6. 1663105Domain d2yzec2: 2yze C:142-297 [153891]
        automated match to d2yzec2
        complexed with nob
      7. 1663106Domain d2yzed1: 2yze D:11-141 [153892]
        automated match to d2yzec1
        complexed with nob
      8. 1663107Domain d2yzed2: 2yze D:142-297 [153893]
        automated match to d2yzec2
        complexed with nob
      9. 1663108Domain d2yzee1: 2yze E:11-141 [153894]
        automated match to d2yzea1
        complexed with nob
      10. 1663109Domain d2yzee2: 2yze E:142-297 [153895]
        automated match to d2yzea2
        complexed with nob
      11. 1663110Domain d2yzef1: 2yze F:11-141 [153896]
        automated match to d2yzef1
        complexed with nob
      12. 1663111Domain d2yzef2: 2yze F:142-297 [153897]
        automated match to d2yzef2
        complexed with nob
      13. 1663112Domain d2yzeg1: 2yze G:11-141 [153898]
        automated match to d2yzec1
        complexed with nob
      14. 1663113Domain d2yzeg2: 2yze G:142-297 [153899]
        automated match to d2yzec2
        complexed with nob
      15. 1663114Domain d2yzeh1: 2yze H:11-141 [153900]
        automated match to d2yzec1
        complexed with nob
      16. 1663115Domain d2yzeh2: 2yze H:142-297 [153901]
        automated match to d2yzec2
        complexed with nob
  2. 1663132Aspergillus flavus [TaxId:5059] [260668] (4 PDB entries)
    1. Domains for 4d12:
      1. 1663139Domain d4d12a1: 4d12 A:1-136 [260669]
        automated match to d4n9sa1
        complexed with mpd, urc
      2. 1663140Domain d4d12a2: 4d12 A:137-301 [260670]
        automated match to d4n9sa2
        complexed with mpd, urc
    2. Domains for 4d13:
      1. 1663133Domain d4d13a1: 4d13 A:1-136 [261772]
        automated match to d4n9sa1
        complexed with iup, mpd
      2. 1663134Domain d4d13a2: 4d13 A:137-296 [261774]
        automated match to d4n9sa2
        complexed with iup, mpd
    3. Domains for 4d17:
      1. 1663135Domain d4d17a1: 4d17 A:1-136 [261776]
        automated match to d4n9sa1
        complexed with iup, mpd, oxy, urc
      2. 1663136Domain d4d17a2: 4d17 A:137-296 [261777]
        automated match to d4n9sa2
        complexed with iup, mpd, oxy, urc
    4. Domains for 4d19:
      1. 1663137Domain d4d19a1: 4d19 A:1-136 [261773]
        automated match to d4n9sa1
        complexed with iup, mpd, oxy, urc
      2. 1663138Domain d4d19a2: 4d19 A:137-296 [261775]
        automated match to d4n9sa2
        complexed with iup, mpd, oxy, urc

More info for Protein automated matches from d.96.1.4: Urate oxidase (uricase)

Timeline for Protein automated matches from d.96.1.4: Urate oxidase (uricase):