Class b: All beta proteins [48724] (176 folds) |
Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies) one turn of helix is made by two pairs of antiparallel strands linked with short turns has appearance of a sandwich of distinct architecture and jelly-roll topology |
Superfamily b.82.2: Clavaminate synthase-like [51197] (16 families) Iron and ketoglutarate-dependent enzymes; elaborated version of this common fold |
Family b.82.2.14: Histone demethylase core [254153] (4 proteins) Jumonji domain; Pfam PF02375 (JmjN) and Pfam PF02373 (JmjC); relationship to FIH1 (b.82.2.6) described in PubMed 16983801 |
Protein automated matches [254635] (1 species) not a true protein |
Human (Homo sapiens) [TaxId:9606] [255633] (14 PDB entries) |
Domain d2w2ia_: 2w2i A: [244010] automated match to d3dxua_ complexed with gol, ni, pd2 |
Domain d2w2ib_: 2w2i B: [244011] automated match to d3dxua_ complexed with gol, ni, pd2 |
Domain d2w2ic_: 2w2i C: [244012] automated match to d3dxua_ complexed with gol, ni, pd2 |
Domain d2xmla_: 2xml A: [244538] automated match to d2gp5a_ complexed with cl, edo, ni, oga, zn |
Domain d2xmlb_: 2xml B: [244539] automated match to d2gp5a_ complexed with cl, edo, ni, oga, zn |
Domain d3dxta_: 3dxt A: [245671] automated match to d2gp5a_ complexed with gol, so4, zn |
Domain d4d6qa_: 4d6q A: [268290] automated match to d3dxua_ complexed with edo, ni, pd2, so4, zn |
Domain d4d6ra_: 4d6r A: [268291] automated match to d3dxua_ complexed with edo, iej, ni, oga, zn |
Domain d4d6sa_: 4d6s A: [268292] automated match to d3dxua_ complexed with dmd, dms, edo, ni, oga, so4, zn |
Domain d4xdoa_: 4xdo A: [270828] automated match to d2xmla_ complexed with edo, fe, oga, pg4, pge, zn |
Domain d4xdob_: 4xdo B: [270829] automated match to d2xmla_ complexed with edo, fe, oga, pg4, pge, zn |
Domain d4xdpa_: 4xdp A: [270830] automated match to d2xmla_ complexed with cl, edo, fe, pg4, pge, trs, zn |
Domain d4xdpb_: 4xdp B: [270827] automated match to d2xmla_ complexed with cl, edo, fe, pg4, pge, trs, zn |
Domain d5a7oa_: 5a7o A: [280220] automated match to d4v2wb_ complexed with 7wh, dms, edo, mn, so4, zn |
Domain d5a7ob_: 5a7o B: [280219] automated match to d4v2wb_ complexed with 7wh, dms, edo, mn, so4, zn |
Domain d5a7wb_: 5a7w B: [280212] Other proteins in same PDB: d5a7wa_ automated match to d4v2wb_ complexed with 35m, dms, edo, mn, so4, zn |
Domain d5f5aa_: 5f5a A: [279923] automated match to d3dxua_ complexed with 5v0, edo, ni, so4, zn |
Domain d5f5ca_: 5f5c A: [280150] automated match to d3dxua_ complexed with 5v3, edo, ni, so4, zn |
Domain d5fjha_: 5fjh A: [278373] automated match to d2xmla_ complexed with cl, edo, mmk, ni, zn |
Domain d5fjhb_: 5fjh B: [278372] automated match to d2xmla_ complexed with cl, edo, mmk, ni, zn |
Domain d5fjka_: 5fjk A: [278374] automated match to d2xmla_ complexed with cl, edo, em6, ni, zn |
Timeline for Protein automated matches from b.82.2.14: Histone demethylase core: