Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1886641Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
  3. 1926950Fold d.130: S-adenosylmethionine synthetase [55972] (1 superfamily)
    duplication: consists of 3 similar intertwined domains
    structural repeat: beta-alpha-beta(2)-alpha-beta; two layers, alpha/beta
  4. 1926951Superfamily d.130.1: S-adenosylmethionine synthetase [55973] (2 families) (S)
  5. 1927050Family d.130.1.0: automated matches [254267] (1 protein)
    not a true family
  6. 1927051Protein automated matches [254617] (8 species)
    not a true protein

Species:

  1. 1927052Burkholderia pseudomallei [TaxId:28450] [255893] (1 PDB entry)
  2. 1927064Campylobacter jejuni [TaxId:195099] [256355] (1 PDB entry)
  3. 1927071Cryptosporidium hominis [TaxId:237895] [256376] (1 PDB entry)
  4. 1927075Entamoeba (Entamoeba histolytica) [TaxId:5759] [256087] (1 PDB entry)
  5. 1927088Human (Homo sapiens) [TaxId:9606] [255522] (2 PDB entries)
    1. Domains for 2obv:
      1. 1927089Domain d2obva1: 2obv A:-3-125 [243311]
        automated match to d2p02a1
        complexed with na, pg4, sam
      2. 1927090Domain d2obva2: 2obv A:126-251 [243312]
        automated match to d2p02a2
        complexed with na, pg4, sam
      3. 1927091Domain d2obva3: 2obv A:252-395 [243313]
        automated match to d2p02a3
        complexed with na, pg4, sam
    2. Domains for 4ndn:
      1. 1927092Domain d4ndna1: 4ndn A:15-115 [259828]
        Other proteins in same PDB: d4ndne_, d4ndnf_
        automated match to d2obva1
        complexed with edo, mg, ppk, sam
      2. 1927093Domain d4ndna2: 4ndn A:135-251 [259829]
        Other proteins in same PDB: d4ndne_, d4ndnf_
        automated match to d2obva2
        complexed with edo, mg, ppk, sam
      3. 1927094Domain d4ndna3: 4ndn A:252-395 [259830]
        Other proteins in same PDB: d4ndne_, d4ndnf_
        automated match to d2obva3
        complexed with edo, mg, ppk, sam
      4. 1927095Domain d4ndnb1: 4ndn B:13-125 [263123]
        Other proteins in same PDB: d4ndne_, d4ndnf_
        automated match to d2obva1
        complexed with edo, mg, ppk, sam
      5. 1927096Domain d4ndnb2: 4ndn B:126-251 [263124]
        Other proteins in same PDB: d4ndne_, d4ndnf_
        automated match to d2obva2
        complexed with edo, mg, ppk, sam
      6. 1927097Domain d4ndnb3: 4ndn B:252-395 [263125]
        Other proteins in same PDB: d4ndne_, d4ndnf_
        automated match to d2obva3
        complexed with edo, mg, ppk, sam
      7. 1927098Domain d4ndnc1: 4ndn C:15-113 [263126]
        Other proteins in same PDB: d4ndne_, d4ndnf_
        automated match to d2obva1
        complexed with edo, mg, ppk, sam
      8. 1927099Domain d4ndnc2: 4ndn C:135-251 [263127]
        Other proteins in same PDB: d4ndne_, d4ndnf_
        automated match to d2obva2
        complexed with edo, mg, ppk, sam
      9. 1927100Domain d4ndnc3: 4ndn C:252-395 [263128]
        Other proteins in same PDB: d4ndne_, d4ndnf_
        automated match to d2obva3
        complexed with edo, mg, ppk, sam
      10. 1927101Domain d4ndnd1: 4ndn D:14-125 [257984]
        Other proteins in same PDB: d4ndne_, d4ndnf_
        automated match to d2obva1
        complexed with edo, mg, ppk, sam
      11. 1927102Domain d4ndnd2: 4ndn D:126-251 [257985]
        Other proteins in same PDB: d4ndne_, d4ndnf_
        automated match to d2obva2
        complexed with edo, mg, ppk, sam
      12. 1927103Domain d4ndnd3: 4ndn D:252-395 [257986]
        Other proteins in same PDB: d4ndne_, d4ndnf_
        automated match to d2obva3
        complexed with edo, mg, ppk, sam
  6. 1927104Mycobacterium avium [TaxId:243243] [256078] (1 PDB entry)
  7. 1927111Mycobacterium marinum [TaxId:216594] [256066] (1 PDB entry)
  8. 1927118Mycobacterium tuberculosis [TaxId:1773] [256098] (1 PDB entry)

More info for Protein automated matches from d.130.1.0: automated matches

Timeline for Protein automated matches from d.130.1.0: automated matches: