SCOPe 2.08: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.08
Class a: All alpha proteins [46456] (290 folds)
Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
Superfamily a.4.5: 'Winged helix' DNA-binding domain [46785] (86 families)
contains a small beta-sheet (wing)
Family a.4.5.22: Heat-shock transcription factor [46873] (2 proteins)
automatically mapped to Pfam PF00447
Protein automated matches [254598] (1 species)
not a true protein

Species:

Human (Homo sapiens) [TaxId:9606] [255429] (7 PDB entries)
1. Domain for 2ldu:
  - Domain d2ldua1: 2ldu A:12-125 [242851]
    Other proteins in same PDB: d2ldua2
    automated match to d1hksa_
2. Domain for 5hdg:
  - Domain d5hdga1: 5hdg A:15-117 [327971]
    Other proteins in same PDB: d5hdga2
    automated match to d1hksa_
    complexed with na
3. Domains for 5hdn:
  1. Domain d5hdna1: 5hdn A:15-118 [328112]
    Other proteins in same PDB: d5hdna2, d5hdnb2, d5hdnc2, d5hdnd2
    automated match to d1hksa_
    protein/DNA complex; complexed with cit, na
  2. Domain d5hdnb1: 5hdn B:15-118 [327955]
    Other proteins in same PDB: d5hdna2, d5hdnb2, d5hdnc2, d5hdnd2
    automated match to d1hksa_
    protein/DNA complex; complexed with cit, na
  3. Domain d5hdnc1: 5hdn C:15-118 [327935]
    Other proteins in same PDB: d5hdna2, d5hdnb2, d5hdnc2, d5hdnd2
    automated match to d1hksa_
    protein/DNA complex; complexed with cit, na
  4. Domain d5hdnd1: 5hdn D:15-118 [327911]
    Other proteins in same PDB: d5hdna2, d5hdnb2, d5hdnc2, d5hdnd2
    automated match to d1hksa_
    protein/DNA complex; complexed with cit, na
4. Domain for 6j6v:
  - Domain d6j6va_: 6j6v A: [379214]
    automated match to d1hksa_
    complexed with na, no3
5. Domains for 7dcj:
  1. Domain d7dcja_: 7dcj A: [417946]
    Other proteins in same PDB: d7dcjb2
    automated match to d1hksa_
    protein/DNA complex; complexed with na
  2. Domain d7dcjb1: 7dcj B:15-120 [417947]
    Other proteins in same PDB: d7dcjb2
    automated match to d1hksa_
    protein/DNA complex; complexed with na
6. Domains for 7dcs:
  1. Domain d7dcsa1: 7dcs A:15-119 [417949]
    Other proteins in same PDB: d7dcsa2, d7dcsb2, d7dcsc2, d7dcsd2
    automated match to d1hksa_
    protein/DNA complex; complexed with na
  2. Domain d7dcsb1: 7dcs B:15-119 [417951]
    Other proteins in same PDB: d7dcsa2, d7dcsb2, d7dcsc2, d7dcsd2
    automated match to d1hksa_
    protein/DNA complex; complexed with na
  3. Domain d7dcsc1: 7dcs C:15-119 [417953]
    Other proteins in same PDB: d7dcsa2, d7dcsb2, d7dcsc2, d7dcsd2
    automated match to d1hksa_
    protein/DNA complex; complexed with na
  4. Domain d7dcsd1: 7dcs D:15-119 [417955]
    Other proteins in same PDB: d7dcsa2, d7dcsb2, d7dcsc2, d7dcsd2
    automated match to d1hksa_
    protein/DNA complex; complexed with na
  5. Domain d7dcse_: 7dcs E: [417957]
    Other proteins in same PDB: d7dcsa2, d7dcsb2, d7dcsc2, d7dcsd2
    automated match to d1hksa_
    protein/DNA complex; complexed with na
  6. Domain d7dcsf_: 7dcs F: [417958]
    Other proteins in same PDB: d7dcsa2, d7dcsb2, d7dcsc2, d7dcsd2
    automated match to d1hksa_
    protein/DNA complex; complexed with na
7. Domains for 7dct:
  1. Domain d7dcta1: 7dct A:15-119 [417959]
    Other proteins in same PDB: d7dcta2, d7dctb2, d7dctc2, d7dctd2, d7dctf2
    automated match to d1hksa_
    protein/DNA complex; complexed with na
  2. Domain d7dctb1: 7dct B:15-119 [417961]
    Other proteins in same PDB: d7dcta2, d7dctb2, d7dctc2, d7dctd2, d7dctf2
    automated match to d1hksa_
    protein/DNA complex; complexed with na
  3. Domain d7dctc1: 7dct C:15-119 [417963]
    Other proteins in same PDB: d7dcta2, d7dctb2, d7dctc2, d7dctd2, d7dctf2
    automated match to d1hksa_
    protein/DNA complex; complexed with na
  4. Domain d7dctd1: 7dct D:15-119 [417965]
    Other proteins in same PDB: d7dcta2, d7dctb2, d7dctc2, d7dctd2, d7dctf2
    automated match to d1hksa_
    protein/DNA complex; complexed with na
  5. Domain d7dcte_: 7dct E: [417967]
    Other proteins in same PDB: d7dcta2, d7dctb2, d7dctc2, d7dctd2, d7dctf2
    automated match to d1hksa_
    protein/DNA complex; complexed with na
  6. Domain d7dctf1: 7dct F:15-119 [417968]
    Other proteins in same PDB: d7dcta2, d7dctb2, d7dctc2, d7dctd2, d7dctf2
    automated match to d1hksa_
    protein/DNA complex; complexed with na

More info for Protein automated matches from a.4.5.22: Heat-shock transcription factor

Timeline for Protein automated matches from a.4.5.22: Heat-shock transcription factor:

Protein automated matches from a.4.5.22: Heat-shock transcription factor first appeared in SCOPe 2.04
Protein automated matches from a.4.5.22: Heat-shock transcription factor appears in SCOPe 2.07