SCOPe 2.07: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.07
Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
Fold d.224: SufE/NifU [82648] (1 superfamily)
alpha(2)-beta(3)-alpha(3); 2 layers alpha/beta, 3-stranded antiparallel beta-sheet; order 123
Superfamily d.224.1: SufE/NifU [82649] (4 families)
iron-sulfur cluster assembly proteins
Family d.224.1.2: NifU/IscU domain [102928] (5 proteins)
Protein automated matches [254586] (5 species)
not a true protein

Species:

Bacillus subtilis [TaxId:224308] [343280] (3 PDB entries)
1. Domains for 5xt5:
  1. Domain d5xt5c_: 5xt5 C: [343353]
    Other proteins in same PDB: d5xt5a1, d5xt5a2, d5xt5b_
    automated match to d1xjsa_
    complexed with plp, zn
  2. Domain d5xt5d_: 5xt5 D: [343281]
    Other proteins in same PDB: d5xt5a1, d5xt5a2, d5xt5b_
    automated match to d1xjsa_
    complexed with plp, zn
2. Domains for 6jzv:
  1. Domain d6jzva_: 6jzv A: [384970]
    automated match to d1xjsa_
    complexed with zn
  2. Domain d6jzvb_: 6jzv B: [384942]
    automated match to d1xjsa_
    complexed with zn
  3. Domain d6jzvc_: 6jzv C: [385009]
    automated match to d1xjsa_
    complexed with zn
  4. Domain d6jzvd_: 6jzv D: [384971]
    automated match to d1xjsa_
    complexed with zn
3. Domains for 6jzw:
  1. Domain d6jzwa_: 6jzw A: [384951]
    automated match to d1xjsa_
    complexed with css, zn
  2. Domain d6jzwb_: 6jzw B: [384969]
    automated match to d1xjsa_
    complexed with css, zn
  3. Domain d6jzwc_: 6jzw C: [384945]
    automated match to d1xjsa_
    complexed with css, zn
  4. Domain d6jzwd_: 6jzw D: [384946]
    automated match to d1xjsa_
    complexed with css, zn
Escherichia coli K-12 [TaxId:83333] [255406] (1 PDB entry)
- Domain for 2l4x:
  - Domain d2l4xa_: 2l4x A: [242768]
    automated match to d1r9pa_
Escherichia coli [TaxId:155864] [255942] (1 PDB entry)
- Domain for 3lvl:
  - Domain d3lvla_: 3lvl A: [247519]
    Other proteins in same PDB: d3lvlb_
    automated match to d1r9pa_
    complexed with plp
Escherichia coli [TaxId:562] [255370] (1 PDB entry)
- Domain for 2kqk:
  - Domain d2kqka_: 2kqk A: [242615]
    automated match to d1r9pa_

Human (Homo sapiens) [TaxId:9606] [341681] (5 PDB entries)

Domains for 5wkp:
1. Domain d5wkpd_: 5wkp D: [341682]
  Other proteins in same PDB: d5wkpa1, d5wkpa2, d5wkpc_, d5wkpe1, d5wkpe2, d5wkpg_
  automated match to d2l4xa_
  complexed with 8q1, plp
2. Domain d5wkph_: 5wkp H: [341691]
  Other proteins in same PDB: d5wkpa1, d5wkpa2, d5wkpc_, d5wkpe1, d5wkpe2, d5wkpg_
  automated match to d2l4xa_
  complexed with 8q1, plp

Domain for 6uxe:

Domain d6uxed1: 6uxe D:35-159 [377182]
Other proteins in same PDB: d6uxea1, d6uxea2, d6uxec_, d6uxed2
automated match to d2l4xa_
complexed with 1pe, 8q1, dtt, edo, edt, gol, mes, p15, peg, pg4, pge, plp

Domain for 6w1d:

Domain d6w1dd1: 6w1d D:35-159 [382534]
Other proteins in same PDB: d6w1da1, d6w1da2, d6w1dc_, d6w1dd2
automated match to d2l4xa_
complexed with 1pe, 8q1, dtt, edo, edt, gol, mes, p15, peg, pg4, pge, plp

Domain for 6wi2:

Domain d6wi2d1: 6wi2 D:35-159 [384489]
Other proteins in same PDB: d6wi2a1, d6wi2a2, d6wi2c_, d6wi2d2
automated match to d2l4xa_
complexed with 1pe, 8q1, edo, edt, ete, gol, mes, peg, pg4, pge, plp; mutant

Domain for 6wih:
- Domain d6wihd1: 6wih D:35-158 [385702]
  Other proteins in same PDB: d6wiha1, d6wiha2, d6wihc_, d6wihd2
  automated match to d2l4xa_
  complexed with 1pe, 8q1, edo, edt, gol, p15, peg, pg4, pge, plp; mutant

More info for Protein automated matches from d.224.1.2: NifU/IscU domain

Timeline for Protein automated matches from d.224.1.2: NifU/IscU domain:

Protein automated matches from d.224.1.2: NifU/IscU domain first appeared in SCOPe 2.04
Protein automated matches from d.224.1.2: NifU/IscU domain appears in SCOPe 2.06
Protein automated matches from d.224.1.2: NifU/IscU domain appears in the current release, SCOPe 2.08