SCOPe 2.05: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.05
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

Family c.1.8.10: alpha-D-glucuronidase/Hyaluronidase catalytic domain [82253] (4 proteins)
Glycosyl hydrolase family 67, GH67; structurally related to GH20; contains extra C-terminal alpha-helical subdomain

Protein automated matches [254553] (2 species)
not a true protein

Species:

Bacteroides thetaiotaomicron [TaxId:226186] [255268] (4 PDB entries)
1. Domains for 2jiw:
  1. Domain d2jiwa2: 2jiw A:127-436 [148102]
    Other proteins in same PDB: d2jiwa1, d2jiwa3, d2jiwb1, d2jiwb3
    automated match to d2choa2
    complexed with beu
  2. Domain d2jiwb2: 2jiw B:127-436 [148105]
    Other proteins in same PDB: d2jiwa1, d2jiwa3, d2jiwb1, d2jiwb3
    automated match to d2choa2
    complexed with beu
2. Domain for 2vvs:
  - Domain d2vvsa2: 2vvs A:127-436 [153656]
    Other proteins in same PDB: d2vvsa1, d2vvsa3
    automated match to d2choa2
    complexed with oan
3. Domain for 2wzh:
  - Domain d2wzha2: 2wzh A:127-436 [244359]
    Other proteins in same PDB: d2wzha1, d2wzha3
    automated match to d2choa2
    complexed with ca, gol, ngo
4. Domain for 4aiu:
  - Domain d4aiua2: 4aiu A:127-436 [251042]
    Other proteins in same PDB: d4aiua1, d4aiua3
    automated match to d2choa2
    complexed with ca, gc3
Clostridium perfringens [TaxId:1502] [255690] (1 PDB entry)
- Domains for 2xpk:
  1. Domain d2xpka2: 2xpk A:179-495 [244577]
    Other proteins in same PDB: d2xpka1, d2xpka3, d2xpkb1, d2xpkb3
    automated match to d2v5ca2
    complexed with z0m
  2. Domain d2xpkb2: 2xpk B:179-495 [244580]
    Other proteins in same PDB: d2xpka1, d2xpka3, d2xpkb1, d2xpkb3
    automated match to d2v5ca2
    complexed with z0m

More info for Protein automated matches from c.1.8.10: alpha-D-glucuronidase/Hyaluronidase catalytic domain

Timeline for Protein automated matches from c.1.8.10: alpha-D-glucuronidase/Hyaluronidase catalytic domain:

Protein automated matches from c.1.8.10: alpha-D-glucuronidase/Hyaluronidase catalytic domain first appeared in SCOPe 2.04
Protein automated matches from c.1.8.10: alpha-D-glucuronidase/Hyaluronidase catalytic domain appears in SCOPe 2.06
Protein automated matches from c.1.8.10: alpha-D-glucuronidase/Hyaluronidase catalytic domain appears in the current release, SCOPe 2.08