Lineage for Protein: automated matches
- Root: SCOPe 2.04
Class c: Alpha and beta proteins (a/b) [51349] (148 folds) 
Fold c.72: Ribokinase-like [53612] (3 superfamilies)
core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
potential superfamily: members of this fold have similar functions but different ATP-binding sites
Superfamily c.72.2: MurD-like peptide ligases, catalytic domain [53623] (3 families) 
has extra strand located between strands 1 and 2Family c.72.2.1: MurCDEF [53624] (5 proteins)
automatically mapped to Pfam PF08245Protein automated matches [254549] (2 species)
not a true protein
Species:
Escherichia coli [TaxId:562] [255258] (8 PDB entries) - Domain for 2jff:
Domain d2jffa3: 2jff A:94-297 [138305]
Other proteins in same PDB: d2jffa1, d2jffa2
automated match to d2jfga3
complexed with lk2, so4
- Domain for 2jfg:
Domain d2jfga3: 2jfg A:94-297 [138308]
Other proteins in same PDB: d2jfga1, d2jfga2
automated match to d2jfga3
complexed with adp, so4, uma
- Domain for 2jfh:
Domain d2jfha3: 2jfh A:94-297 [138311]
Other proteins in same PDB: d2jfha1, d2jfha2
automated match to d2jfga3
complexed with lk1, so4
- Domain for 2uuo:
Domain d2uuoa3: 2uuo A:94-297 [152199]
Other proteins in same PDB: d2uuoa1, d2uuoa2
automated match to d4uaga3
complexed with lk3, so4
- Domain for 2uup:
Domain d2uupa3: 2uup A:94-297 [152202]
Other proteins in same PDB: d2uupa1, d2uupa2
automated match to d4uaga3
complexed with lk4, so4
- Domain for 2vtd:
Domain d2vtda2: 2vtd A:94-297 [243940]
Other proteins in same PDB: d2vtda1, d2vtda3
automated match to d4uaga3
complexed with lkm, so4
- Domain for 2vte:
Domain d2vtea2: 2vte A:94-297 [243943]
Other proteins in same PDB: d2vtea1, d2vtea3
automated match to d4uaga3
complexed with ik4, so4
- Domain for 2xpc:
Domain d2xpca2: 2xpc A:94-297 [244566]
Other proteins in same PDB: d2xpca1, d2xpca3
automated match to d4uaga3
complexed with 051, cl, dms, so4
- Domain for 2jff:
Escherichia coli [TaxId:668369] [255650] (2 PDB entries) - Domain for 2wjp:
Domain d2wjpa2: 2wjp A:94-297 [244148]
Other proteins in same PDB: d2wjpa1, d2wjpa3
automated match to d4uaga3
complexed with azi, cl, d17, dms, so4
- Domain for 2x5o:
Domain d2x5oa2: 2x5o A:94-297 [244426]
Other proteins in same PDB: d2x5oa1, d2x5oa3
automated match to d4uaga3
complexed with azi, cl, so3, so4, vsv
- Domain for 2wjp:
More info for Protein automated matches from c.72.2.1: MurCDEF
Timeline for Protein automated matches from c.72.2.1: MurCDEF:
- Protein automated matches from c.72.2.1: MurCDEF is new in SCOPe 2.04-stable
- Protein automated matches from c.72.2.1: MurCDEF appears in SCOPe 2.05
- Protein automated matches from c.72.2.1: MurCDEF appears in the current release, SCOPe 2.08