Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2137471Fold c.72: Ribokinase-like [53612] (3 superfamilies)
    core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
    potential superfamily: members of this fold have similar functions but different ATP-binding sites
  4. 2137975Superfamily c.72.2: MurD-like peptide ligases, catalytic domain [53623] (3 families) (S)
    has extra strand located between strands 1 and 2
  5. 2137976Family c.72.2.1: MurCDEF [53624] (5 protein domains)
    automatically mapped to Pfam PF08245
  6. 2138005Protein automated matches [254549] (3 species)
    not a true protein

Species:

  1. 2138006Escherichia coli [TaxId:562] [255258] (8 PDB entries)
    1. Domain for 2jff:
    2. Domain for 2jfg:
    3. Domain for 2jfh:
    4. Domain for 2uuo:
    5. Domain for 2uup:
    6. Domain for 2vtd:
    7. Domain for 2vte:
    8. Domain for 2xpc:
  2. 2138015Escherichia coli [TaxId:668369] [255650] (2 PDB entries)
    1. Domain for 2wjp:
    2. Domain for 2x5o:
  3. 2273188Escherichia coli [TaxId:83333] [316489] (1 PDB entry)

More info for Protein automated matches from c.72.2.1: MurCDEF

Timeline for Protein automated matches from c.72.2.1: MurCDEF: