SCOPe 2.05: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.05
Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
Fold d.14: Ribosomal protein S5 domain 2-like [54210] (1 superfamily)
core: beta(3)-alpha-beta-alpha; 2 layers: alpha/beta; left-handed crossover
Superfamily d.14.1: Ribosomal protein S5 domain 2-like [54211] (13 families)
Family d.14.1.9: Imidazole glycerol phosphate dehydratase [102766] (2 proteins)
duplication; there are two structural repeats of this fold
Protein automated matches [254526] (1 species)
not a true protein

Species:

Thale cress (Arabidopsis thaliana) [TaxId:3702] [255158] (7 PDB entries)
1. Domains for 2f1d:
  1. Domain d2f1db1: 2f1d B:10-95 [132730]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da1
    complexed with mn, so4
  2. Domain d2f1db2: 2f1d B:96-192 [132731]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da2
    complexed with mn, so4
  3. Domain d2f1dc1: 2f1d C:10-95 [132732]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da1
    complexed with mn, so4
  4. Domain d2f1dc2: 2f1d C:96-192 [132733]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da2
    complexed with mn, so4
  5. Domain d2f1dd1: 2f1d D:10-95 [132734]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da1
    complexed with mn, so4
  6. Domain d2f1dd2: 2f1d D:96-192 [132735]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da2
    complexed with mn, so4
  7. Domain d2f1de1: 2f1d E:10-95 [132736]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da1
    complexed with mn, so4
  8. Domain d2f1de2: 2f1d E:96-192 [132737]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da2
    complexed with mn, so4
  9. Domain d2f1df1: 2f1d F:10-95 [132738]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da1
    complexed with mn, so4
  10. Domain d2f1df2: 2f1d F:96-192 [132739]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da2
    complexed with mn, so4
  11. Domain d2f1dg1: 2f1d G:10-95 [132740]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da1
    complexed with mn, so4
  12. Domain d2f1dg2: 2f1d G:96-192 [132741]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da2
    complexed with mn, so4
  13. Domain d2f1dh1: 2f1d H:10-95 [132742]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da1
    complexed with mn, so4
  14. Domain d2f1dh2: 2f1d H:96-192 [132743]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da2
    complexed with mn, so4
  15. Domain d2f1di1: 2f1d I:10-95 [132744]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da1
    complexed with mn, so4
  16. Domain d2f1di2: 2f1d I:96-192 [132745]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da2
    complexed with mn, so4
  17. Domain d2f1dj1: 2f1d J:10-95 [132746]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da1
    complexed with mn, so4
  18. Domain d2f1dj2: 2f1d J:96-192 [132747]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da2
    complexed with mn, so4
  19. Domain d2f1dk1: 2f1d K:10-95 [132748]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da1
    complexed with mn, so4
  20. Domain d2f1dk2: 2f1d K:96-192 [132749]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da2
    complexed with mn, so4
  21. Domain d2f1dl1: 2f1d L:10-95 [132750]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da1
    complexed with mn, so4
  22. Domain d2f1dl2: 2f1d L:96-192 [132751]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da2
    complexed with mn, so4
  23. Domain d2f1dm1: 2f1d M:10-95 [132752]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da1
    complexed with mn, so4
  24. Domain d2f1dm2: 2f1d M:96-192 [132753]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da2
    complexed with mn, so4
  25. Domain d2f1dn1: 2f1d N:10-95 [132754]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da1
    complexed with mn, so4
  26. Domain d2f1dn2: 2f1d N:96-192 [132755]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da2
    complexed with mn, so4
  27. Domain d2f1do1: 2f1d O:10-95 [132756]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da1
    complexed with mn, so4
  28. Domain d2f1do2: 2f1d O:96-192 [132757]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da2
    complexed with mn, so4
  29. Domain d2f1dp1: 2f1d P:10-95 [132758]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da1
    complexed with mn, so4
  30. Domain d2f1dp2: 2f1d P:96-192 [132759]
    Other proteins in same PDB: d2f1da1, d2f1da2
    automated match to d2f1da2
    complexed with mn, so4
2. Domain for 4mu0:
  - Domain d4mu0a2: 4mu0 A:96-193 [259815]
    Other proteins in same PDB: d4mu0a1
    automated match to d2f1da2
    complexed with cl, edo, mn, tri, trs
3. Domain for 4mu1:
  - Domain d4mu1a2: 4mu1 A:96-193 [259817]
    Other proteins in same PDB: d4mu1a1
    automated match to d2f1da2
    complexed with edo, imd, mn, so4
4. Domain for 4mu3:
  - Domain d4mu3a2: 4mu3 A:96-194 [259811]
    Other proteins in same PDB: d4mu3a1
    automated match to d2f1da2
    complexed with edo, ig2, iyp, mn; mutant
5. Domain for 4mu4:
  - Domain d4mu4a2: 4mu4 A:96-207 [266780]
    Other proteins in same PDB: d4mu4a1
    automated match to d4mu3a2
    complexed with edo, iyp, mn; mutant
6. Domain for 4qnj:
  - Domain d4qnja2: 4qnj A:96-193 [274252]
    Other proteins in same PDB: d4qnja1
    automated match to d4mu3a2
    complexed with cl, fmt, mn, trs
7. Domains for 4qnk:
  1. Domain d4qnka2: 4qnk A:96-193 [274248]
    Other proteins in same PDB: d4qnka1, d4qnkb1, d4qnkc1, d4qnkd1, d4qnke1, d4qnkf1, d4qnkg1, d4qnkh1
    automated match to d4mu3a2
    complexed with edo, mn, na, po4
  2. Domain d4qnkb2: 4qnk B:96-193 [274260]
    Other proteins in same PDB: d4qnka1, d4qnkb1, d4qnkc1, d4qnkd1, d4qnke1, d4qnkf1, d4qnkg1, d4qnkh1
    automated match to d4mu3a2
    complexed with edo, mn, na, po4
  3. Domain d4qnkc2: 4qnk C:96-193 [274258]
    Other proteins in same PDB: d4qnka1, d4qnkb1, d4qnkc1, d4qnkd1, d4qnke1, d4qnkf1, d4qnkg1, d4qnkh1
    automated match to d4mu3a2
    complexed with edo, mn, na, po4
  4. Domain d4qnkd2: 4qnk D:96-193 [274254]
    Other proteins in same PDB: d4qnka1, d4qnkb1, d4qnkc1, d4qnkd1, d4qnke1, d4qnkf1, d4qnkg1, d4qnkh1
    automated match to d4mu3a2
    complexed with edo, mn, na, po4
  5. Domain d4qnke2: 4qnk E:96-193 [274256]
    Other proteins in same PDB: d4qnka1, d4qnkb1, d4qnkc1, d4qnkd1, d4qnke1, d4qnkf1, d4qnkg1, d4qnkh1
    automated match to d4mu3a2
    complexed with edo, mn, na, po4
  6. Domain d4qnkf2: 4qnk F:96-193 [274250]
    Other proteins in same PDB: d4qnka1, d4qnkb1, d4qnkc1, d4qnkd1, d4qnke1, d4qnkf1, d4qnkg1, d4qnkh1
    automated match to d4mu3a2
    complexed with edo, mn, na, po4
  7. Domain d4qnkg2: 4qnk G:96-193 [274244]
    Other proteins in same PDB: d4qnka1, d4qnkb1, d4qnkc1, d4qnkd1, d4qnke1, d4qnkf1, d4qnkg1, d4qnkh1
    automated match to d4mu3a2
    complexed with edo, mn, na, po4
  8. Domain d4qnkh2: 4qnk H:96-193 [274246]
    Other proteins in same PDB: d4qnka1, d4qnkb1, d4qnkc1, d4qnkd1, d4qnke1, d4qnkf1, d4qnkg1, d4qnkh1
    automated match to d4mu3a2
    complexed with edo, mn, na, po4

More info for Protein automated matches from d.14.1.9: Imidazole glycerol phosphate dehydratase

Timeline for Protein automated matches from d.14.1.9: Imidazole glycerol phosphate dehydratase:

Protein automated matches from d.14.1.9: Imidazole glycerol phosphate dehydratase first appeared in SCOPe 2.04
Protein automated matches from d.14.1.9: Imidazole glycerol phosphate dehydratase appears in SCOPe 2.06
Protein automated matches from d.14.1.9: Imidazole glycerol phosphate dehydratase appears in the current release, SCOPe 2.07